Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01320 ATGTTTGCTTTTGATACATCTCATGGTGGGTCTGTGGCAGATGTTTCTCGCATGTGGACCCCTAAGCGAATACATAGTAGGCTACTCATGAATATTTACGTCGTCTTAATCAAAGCGAAGATTAACTTGATGTTACCTTTTGGTCCCATGGCGATCCTTCTCCATTATCTTACTGGAAAGCATGGGTGGGTCTTCTTCTTCAGCTTGGTAGGCATCACACCTTTAGCCGAGCGTTTGGGTTATGCAACAGAGCAGCTTGCATTTTACACAGGATCTACAGTTGGTGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAAATGATAATTTCAATATATGCTTTGAAGCATGGTATGATAAGAGTTGTTCAACAGTCATTACTGGGCTCCATCCTATCTAATATGCTGTTAGTGCTCGGATGTGCCTTCTTCACTGGTGGCATCATTCATTACAAGAAAGTTCAGGTCTTCAATAAGCTGAAGAGTCAGCAGAATCTTTATAGTCCAGTCTGTGAGGAAGGGAACCGTGATGAAGATGACTCTGATGAAGCCTATCAACATAGAAATGAAGAATACGCGGATGAAGAGGAGGTTCCTGAGATAACTCAATGGGAAGCAATTGGATGGCTTGCAATTTTGACAGCATGGATTTCCATTCTCTCTAGATACCTTGTTGATGCCATACAGGGAGCATCTGACTCCTGGAACATGCCAGTGGCTTTTATTAGTGTCATCCTGCTGCCTATTGTAGGAAATGCCGCAGAACATGCGAGTGCAATTATGTTTGCCATGAAGGACAAGCTTGACATCACTCTGGGAGTTGCAATTGGATCATCTACACAAATATCAATGTTTGTGATTCCGTTCTGTGTGGTGGTTGGTTGGTTTATGGGAAAACCAATGGACTTAAATTTTCAACTCTTTGAGACTGCTACACTCTTTATCACTGTATTAGTTGTGGCATTTATGCTGCAGGAAGGCACTTCAAACTATTTCAAAGGGCTGATGCTTATTCTGTGCTATCTCATAGTTGCAGCTAGTTTCTTTGTACATATCGACCCTTCAAACAGTGAGGATGAAAGATTTAAATATGGAGACACCTTGCATGAATAA 1113 0.4142 MFAFDTSHGGSVADVSRMWTPKRIHSRLLMNIYVVLIKAKINLMLPFGPMAILLHYLTGKHGWVFFFSLVGITPLAERLGYATEQLAFYTGSTVGGLLNATFGNATEMIISIYALKHGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIIHYKKVQVFNKLKSQQNLYSPVCEEGNRDEDDSDEAYQHRNEEYADEEEVPEITQWEAIGWLAILTAWISILSRYLVDAIQGASDSWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWFMGKPMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHIDPSNSEDERFKYGDTLHE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01320 370 Gene3D - 91 350 IPR044880 -
Eupl10g01320 370 FunFam Vacuolar cation/proton exchanger 194 350 - -
Eupl10g01320 370 Pfam Sodium/calcium exchanger protein 207 346 IPR004837 GO:0016020|GO:0055085
Eupl10g01320 370 Pfam Sodium/calcium exchanger protein 63 155 IPR004837 GO:0016020|GO:0055085
Eupl10g01320 370 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 160 354 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01320 Eupl-Chr10 33438955 33450121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01320 10 358 Antiporters AT1G55730 60.197 1.75e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01320 K07300 - ming:122079521 537.724