Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01312 ATGGCTCATTCGCTAATGCCGTCACCTCCCACTCTTACCTTCCTCTTCTTTCTCTTGTTTTCCTTCTCAACGGTCCGCTCTGATTTTCTCCAGGCGGAGTGCTTAACGGCTTCTTCTTCTGTTTTCTCATCGTCTGTTAAGTTGACAATTGAGGAAGTAAGGAAGGTGACGGCTCTTGTTTCCAAATTCGCTAATAAATTCCATAATTTACGACTGTCGAATGCCATTAACGACTGTCTTGATTTGCTTGATTTATCTGCCGATGAGTTGAGTTGGACACTCTCAGCAACGGAGAATCCCAATGGTAAGGATAACAGCACAGGCAACCGGAGATCGGATCTAAGGGCTTGGTTGAGCGCGGCACTTGGAAATCAAGACACGTGCCTTGATGGATTTGATGGTACTAATAGTTTCGTTAAGGGTCTTGTTTCAGGGAGTCTCGAAAAAGTAACGACGCTCGTGGCAAACATTCTTCGCATGGTACGTCAGATTCCCTCTACCAATTATAAGTCTTCTGATGGTCGAAGCAGTAATATTCCGTCATGGATGCAAATAAGAGACCGGAGGCTCTTGCAAGCTCCAGCAAGTGGGATATCGGCTGATGTGGTTGTTGCTGTGGATGGGTCAGGAAATTTCAGTACGGTGATGGATGCAGTATTAGCGGCTCCTGACTATAGCATGCGACGGTATGTGATATACATTAAGAGAGGTGTGTACAAAGAGAATGTGGAGATCAAGAAAAAGAAATGGAATCTGATGATGATCGGAGATGGGATGGACATTACCGTTATTTCCGGTAATCGGAGCTTCATTGACGGTTGGACCACGTTTAGATCTGCTACGTTTGCTGTTTCCGGAAAGGGATTCATAGCGAGAGACATAACATTCGAGAACACGGCAGGTCCTGCAAAGCACCAAGCGGTGGCACTCCGATCCGACTCTGATCTCTCAGCCTACTACCGATGTAGTATCCGAGGGTACCAAGACACCTTGTATGCGCATTCTCTCCGCCAATTCTATCGAGAATGCCGAATCACCGGAACCGTTGACTTCATTTTCGGCAATGGTGCGGTTGTCTTCCAAAACTGCCAAATCCTTGCCAAGAAGCCCCTTCCAGACCAGAAGAATTCCATAACTGCACAAGGCCGTAAAGACCCGAATCAAAACACCGGCTTTTCTATACAATTCTCTAACATTACGGGGGATTCGGACCTCCTAGCTTCGATGAACTCAACTCAGACGTACCTAGGGCGGCCATGGAAGCAGTACTCACGGACGGTGTTCATGCAGTCGTATATGAGTAGTGTGATAAGGCCAGAAGGGTGGTTAGAGTGGCAGGGAAATTTTGCATTGGATACACTCTATTATGGGGAGTACATGAATTACGGACCGGGTTCGGGTATTGGCAGCCGGGTTAAATGGGCGGGTTTCCATGCAATTAACGAGTCGAGTCAAGCAAGTAACTTTACTGTAGCTCAATTCATCGATGGCAATTTGTGGTTGCCATCAACAGGCGTCAAATTCACGGCGGGTATGGTGATCTAA 1545 0.4693 MAHSLMPSPPTLTFLFFLLFSFSTVRSDFLQAECLTASSSVFSSSVKLTIEEVRKVTALVSKFANKFHNLRLSNAINDCLDLLDLSADELSWTLSATENPNGKDNSTGNRRSDLRAWLSAALGNQDTCLDGFDGTNSFVKGLVSGSLEKVTTLVANILRMVRQIPSTNYKSSDGRSSNIPSWMQIRDRRLLQAPASGISADVVVAVDGSGNFSTVMDAVLAAPDYSMRRYVIYIKRGVYKENVEIKKKKWNLMMIGDGMDITVISGNRSFIDGWTTFRSATFAVSGKGFIARDITFENTAGPAKHQAVALRSDSDLSAYYRCSIRGYQDTLYAHSLRQFYRECRITGTVDFIFGNGAVVFQNCQILAKKPLPDQKNSITAQGRKDPNQNTGFSIQFSNITGDSDLLASMNSTQTYLGRPWKQYSRTVFMQSYMSSVIRPEGWLEWQGNFALDTLYYGEYMNYGPGSGIGSRVKWAGFHAINESSQASNFTVAQFIDGNLWLPSTGVKFTAGMVI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01312 514 CDD PMEI-like_4 27 165 - -
Eupl10g01312 514 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 166 IPR035513 -
Eupl10g01312 514 Pfam Plant invertase/pectin methylesterase inhibitor 37 159 IPR006501 GO:0004857
Eupl10g01312 514 PANTHER PECTINESTERASE 30 502 - -
Eupl10g01312 514 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 165 IPR035513 -
Eupl10g01312 514 ProSitePatterns Pectinesterase signature 2. 345 354 IPR033131 -
Eupl10g01312 514 FunFam Pectinesterase 195 512 - -
Eupl10g01312 514 ProSitePatterns Pectinesterase signature 1. 226 245 IPR018040 -
Eupl10g01312 514 SMART PMEI_2 25 160 IPR006501 GO:0004857
Eupl10g01312 514 SUPERFAMILY Pectin lyase-like 197 511 IPR011050 -
Eupl10g01312 514 Pfam Pectinesterase 201 498 IPR000070 GO:0030599|GO:0042545
Eupl10g01312 514 Gene3D - 195 512 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01312 Eupl-Chr10 33352320 33355215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01312 11 513 Carbohydrate Esterase AT3G43270 62.741 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01312 K01051 - nnu:104609248 770.77