Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01311 ATGGCTTCTTCCCTTCTAAAAATATTTCTAATCCTCTCTGCAGTCTTCTTCTCAAGAACATGGGCTCTCAACTCTACTACTAATTCTACTTCTTCTTCTTCTCTAGATACCCATTTATCTTCCGTAAGATCTATTTGCAAATCCACACCATACCCAGATGTCTGTTTTGATTCATTGAAGCTATCCATCTCAATAAACATCAATCCAAACATCATTAGCTATCTTCTTCAATCCCTTCAGATCGCAATTTCTGAAACTGGGAAGCTCTCGGATCTCTTCTTCCATGTAGGAAACTCTGGTATCATCGAAAAACAAAGGGGAACCATCCAAGATTGCAGGGAACTCCACCAAATTACAATGTCATCTCTACAGAAATCAGAGTCCCGAATCCGTTCAGCAGATTCTCGTAAGTTATACGACGCAAAGGCCTTCCTCAGTGCGGCACTCACGAATAAAAACACTTGCTTAGAAGGCCTTGATTCAGCTGTGGGTCCACTTAAACCAGTCCTCGTGAATTCCATGATTGATGCTTATAAGCATGTAAGTAATTCTCTTTCAATTCTCTCCAAATCTATGCCGGAGACATTAGAAGGCGGTACCAACCGTCGTCTCATGGCTTTTCCAAGGTGGGTGTCTCGTCGAATCTTGCAGAAGTTGGATGAGGAATACGACCCAAGTGCGGTGCTTACGGTGGCTGCAGATGGGAGCGGAAACTTTTCGACGATCACTGATGCGATTGATTTCGCTCCGAATAACAGTTATGATAGAACAATTATCTATATTAGAGAAGGGGTGTATCAGGAAAATGTGGTAATTCCAAGCTACAAGACTAATATTGTTCTGTTGGGAGACGGAAGAGATGTTACCGTAATTACAGCTAATAGAAACGTTGTTGATGGTTGGACTACTTTCAGGTCTGCAACTGTTGCGGTCTCTGGTGATGGTTTTTTGGCACGGGACATAACTTTCGAGAACACGGCGGGAGCAGAAAAACACCAAGCTGTTGCCATACGTGTGAATGCTGACTTAGCTGCTGTGTATCGGTGCACCATCAATGGGTACCAAGACACCTTGTACGTCCATTCATTCCGACAATTCTACCGAGAATGTGACATATCCGGAACCGTCGATTTCATATTTGGGAATGCAGCAGTTGTGTTCCAGGGATGTAACATCATAGCAAGATTGCCCATGCCTGGCCAATTCAACGCGATCACAGCACAATCTAGAGACTCCCCAGATGAGAACACCGGGATTTCGATACAAAATTGTTCGATTTTGGCTTCCGATGACTTGTACTCGAATCTTAGCAGTGTCAAGAGCTATTTGGGAAGGCCATGGAAGATATACTCTACCACGGTTTATATTGAGTCCTACATTGACGACTTCATAGACCCTGCGGGGTGGAAGGAGTGGTCAGGGGATGTAGGGTTAGACACCTTGTATTATGGAGAGTATGATAACAGTGGGCCAGGTTCGGCGACGGAGAATCGTGTCACCTGGCCGGGATATCACATAATGGATTATTATGATGCATCCAATTTTACTGTTTCCGAGTTCATTACCGGCGACGAGTGGCTCGAATCGACTTCATTTCCTTATGATGATGGGGTTTAA 1617 0.4409 MASSLLKIFLILSAVFFSRTWALNSTTNSTSSSSLDTHLSSVRSICKSTPYPDVCFDSLKLSISININPNIISYLLQSLQIAISETGKLSDLFFHVGNSGIIEKQRGTIQDCRELHQITMSSLQKSESRIRSADSRKLYDAKAFLSAALTNKNTCLEGLDSAVGPLKPVLVNSMIDAYKHVSNSLSILSKSMPETLEGGTNRRLMAFPRWVSRRILQKLDEEYDPSAVLTVAADGSGNFSTITDAIDFAPNNSYDRTIIYIREGVYQENVVIPSYKTNIVLLGDGRDVTVITANRNVVDGWTTFRSATVAVSGDGFLARDITFENTAGAEKHQAVAIRVNADLAAVYRCTINGYQDTLYVHSFRQFYRECDISGTVDFIFGNAAVVFQGCNIIARLPMPGQFNAITAQSRDSPDENTGISIQNCSILASDDLYSNLSSVKSYLGRPWKIYSTTVYIESYIDDFIDPAGWKEWSGDVGLDTLYYGEYDNSGPGSATENRVTWPGYHIMDYYDASNFTVSEFITGDEWLESTSFPYDDGV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01311 538 ProSitePatterns Pectinesterase signature 2. 372 381 IPR033131 -
Eupl10g01311 538 PANTHER PECTINESTERASE 16 528 - -
Eupl10g01311 538 CDD PMEI-like_3 44 190 - -
Eupl10g01311 538 SMART PMEI_2 37 187 IPR006501 GO:0004857
Eupl10g01311 538 Pfam Pectinesterase 230 524 IPR000070 GO:0030599|GO:0042545
Eupl10g01311 538 Gene3D - 224 538 IPR012334 -
Eupl10g01311 538 FunFam Pectinesterase 222 538 - -
Eupl10g01311 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 190 IPR035513 -
Eupl10g01311 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 190 IPR035513 -
Eupl10g01311 538 SUPERFAMILY Pectin lyase-like 225 535 IPR011050 -
Eupl10g01311 538 FunFam Pectinesterase 38 190 - -
Eupl10g01311 538 NCBIfam pectinesterase inhibitor domain 21 190 IPR006501 GO:0004857
Eupl10g01311 538 Pfam Plant invertase/pectin methylesterase inhibitor 41 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01311 Eupl-Chr10 33344421 33347321 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01311 34 538 Carbohydrate Esterase AT2G26440 65.896 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01311 - - nnu:104600446 823.542