Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01309 ATGGATTCTATCAAGTCCGTCAAGGGCTACGCTAAGGTTGACGACTTACGAGATCCGGCGTTTCGCCCAAACACCCGAAGGCTTTTGATCATCATCAGTTGTTCTGCGATCTTCTTAACGACGGTGATCATTGTGGTGGCCGGAACCTTGATACTCAAGAACGACCCCGATTCCACTCCGATGACCCCAGCCGAGTCAATCAAAGCCGTCTGTAGTGTGACTCAGTACCCCAAATCGTGCTTCTCTAGCATTTCTTCGCTGGAAAGGTCCAAAAAAGAAGACCCAGAAGAGCTCTTCAGGCTCTCTTTGCAAGTCGCCTTTAACGAGCTCTCCAACCTCTCTTCAGTGCCGGGAAAGCTCATCGCCAAAGTCAACGACCCTCGAGTCGAATCCGCGTTACGTGATTGCGAGGGCCTCTTTGAGGACGGCGTTGACCAACTTAACACATCGATTTCGTCCATGCAGGCGGGTCAGGGGGAGAAGTTGTTATCGGCTTCTAAGATCAACAACATCAAGACCTGGATCAGCGCCGCCATGACCGATCAGGCGACCTGTTTGGATGGGTTAGATGAGATGAATTCCACTCTCCGGGAAGAGATGAAGACTGCGATGCATAATTCTACGGAGTTTACGAGTAACAGCTTAGCCATCGCTACTAAGATCTTGACCATTCTTGACGATCTGGACATTCCGATTCACCGCAAATTACTTCAGGTATGA 720 0.5 MDSIKSVKGYAKVDDLRDPAFRPNTRRLLIIISCSAIFLTTVIIVVAGTLILKNDPDSTPMTPAESIKAVCSVTQYPKSCFSSISSLERSKKEDPEELFRLSLQVAFNELSNLSSVPGKLIAKVNDPRVESALRDCEGLFEDGVDQLNTSISSMQAGQGEKLLSASKINNIKTWISAAMTDQATCLDGLDEMNSTLREEMKTAMHNSTEFTSNSLAIATKILTILDDLDIPIHRKLLQV* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01309 239 SMART PMEI_2 62 217 IPR006501 GO:0004857
Eupl10g01309 239 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 222 IPR035513 -
Eupl10g01309 239 PANTHER PECTINESTERASE 42 219 - -
Eupl10g01309 239 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 221 IPR035513 -
Eupl10g01309 239 CDD PMEI-like_3 69 223 - -
Eupl10g01309 239 FunFam Pectinesterase 63 222 - -
Eupl10g01309 239 Pfam Plant invertase/pectin methylesterase inhibitor 66 217 IPR006501 GO:0004857
Eupl10g01309 239 NCBIfam pectinesterase inhibitor domain 51 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01309 Eupl-Chr10 33331574 33332729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01309 1 235 Carbohydrate Esterase AT1G53840 47.791 8.43e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01309 - - nnu:104609252 275.789