Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01291 ATGGGGAGAGAACGTGAGGTTCAAAAACAACCGATCTCGTACACAGTCGAGCAGCTCGTCGCCGTGAACCCATACAATCCAGACATCCTCCCCGACCTCGAAAGCTACGTGAACGAGCAGGTTTCATCAGAAACATACAGTTTGGAAGCAAATCTTTGCCTTCTTCGACTCTATCAGTTTGAACCAGAGCGGATGAGTACCCAGATTGTCGCTCGCATTTTGGTTAAGGCTCTTATGGCGATGCCTGCACCAGATTTCAGCCTTTGTCTCTTCTTAATCCCTGAGCGAGTGCAAATGGAGGAACAGTTCAAGACACTGATTGTTCTGTCTCACTATCTGGAGGTATGTCTTCATGGTATCTCTGACACAAACATGCACATACACTTGAAATCGTTCAACATTCCATGCTTCCCTCTTTTTACACTGCAGACAGCAAGATTTCGGCAGTTCTGGGATGAGGCTGCAAAGAACCGCAGCATAGTTGAAGTCGTGCCAGGTTTTGAGCAGGCAATCCAAGGTTACGCAATTCACGTCCTTTCCCTGACTTATCAAAAGGTTCCCAGGCCCGTACTTGCAGAGGCTATCAACATTGAAGGCCTCTCCCTGGACAAGTTCTTAGAGCACCAGGTAGCCAACAGCGGTTGGGCTATTGAGAAGGGTCATGGTCGGGGCCAGCTCATTACCCTCCCTTGCAATGAGTTCAACCAGCCGGAGCTTAAGAAAAACACTGCGGATAGCATCCCGTTGGAGCACCTCACCCGGATCTTTCCCATTCTCGGGTAA 783 0.4917 MGREREVQKQPISYTVEQLVAVNPYNPDILPDLESYVNEQVSSETYSLEANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLEVCLHGISDTNMHIHLKSFNIPCFPLFTLQTARFRQFWDEAAKNRSIVEVVPGFEQAIQGYAIHVLSLTYQKVPRPVLAEAINIEGLSLDKFLEHQVANSGWAIEKGHGRGQLITLPCNEFNQPELKKNTADSIPLEHLTRIFPILG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01291 260 FunFam Eukaryotic translation initiation factor 3 subunit K 8 119 - -
Eupl10g01291 260 Gene3D - 156 258 IPR036388 -
Eupl10g01291 260 SUPERFAMILY "Winged helix" DNA-binding domain 165 257 IPR036390 -
Eupl10g01291 260 Gene3D ARM repeat; domain 1 7 119 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Eupl10g01291 260 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 6 260 IPR009374 GO:0003743|GO:0005737|GO:0005852
Eupl10g01291 260 Pfam CSN8/PSMD8/EIF3K family 142 220 IPR033464 -
Eupl10g01291 260 FunFam Eukaryotic translation initiation factor 3 subunit K 156 259 - -
Eupl10g01291 260 SUPERFAMILY ARM repeat 9 117 IPR016024 -
Eupl10g01291 260 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 141 257 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01291 Eupl-Chr10 33090158 33095291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01291 1 260 Eukaryotic Initiation Factors Gene Family AT4G33250 67.308 1.53e-121 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01291 K15028 - ming:122084099 414.846