Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01287 ATGGAAGGAAAACTGATGCACGTCACCGTTCCGGCGAATTTTCTACTCCTCCACCTCGTCCTCCTCCTCCCCATCATCTCCCATGGCTTCCCACTAATCCCTGCCGATCCGGCCCAAATAGGAAGTTGGACAAGCGCCAACATACAGAGATTCCAGGCAGCTACGGCTGAGAACGGCGTTACAGTGATCAAGGTGAGGAAAGACGGTACGGGTGATTTCAAGACGTTGACTGATGCCGTCAAGAGTATTCCGTCAGGGAACACCAAGCGCACAATCATATGGATTGGACCCGGGGAGTATCGGGAGAAAGTAAAGGTGGATAGAACGAAGCCGTTCGTCACATTCTACGGATCGCCTGGTAATATGACGAAGTTGTCCTACGACGGTACAGCCGCGAAGTACGGAACCCTCTACAGCGCCACGATAGAAGTGGAGTCTGATGATTTCATGGCCGTCAATATTATCTTCGTGAATACAGCCCCCGAGCCAGATGGAAAAAGGGCAGGAAGTCAGGCGGTAGCGATGAGAATCGCCGGGGATAGGGCCGCCTTCTATAACTGCAAGTTCATTGGGTTTCAAGACACTCTATGTGATGATATAGGGAATCATTTTTTCAAGGACTGTTACATTGAAGGCACAATTGATTTCATATTTGGGAATGGAAAATCTATCTACTTGAATACAGAGATACATTCGAAGGCAAGGGCTGGGTTTGCAGCGATCACGGCACAGGCGAATGAACTTCAAAACAATGGTAGCGGATTCAGTTTTGTACACTGCAAAATAACGGGTACAGGGAACACTTACCTGGGTCGGGCATGGATGCCAAGATCGAGGGTGGTGTTCGCATACACATACATGGACTCTCTCGTCCACCCTGCAGGATGGTATGACAGGGGGATCACCGAACGTGCTAAGACTGTGTTCTACGGCGAGTACAAATGCATGGGACCAGGGGCCAACACAAGCAAGCGCGTAAGCTACACGAAGATGCTAACAGACGAAGAAGCAAAACCCTTCTTGAACATGAACTTCATCAATGCTGACTCTTGGCTTCGCACCCCTCCAAAACTATAA 1077 0.4949 MEGKLMHVTVPANFLLLHLVLLLPIISHGFPLIPADPAQIGSWTSANIQRFQAATAENGVTVIKVRKDGTGDFKTLTDAVKSIPSGNTKRTIIWIGPGEYREKVKVDRTKPFVTFYGSPGNMTKLSYDGTAAKYGTLYSATIEVESDDFMAVNIIFVNTAPEPDGKRAGSQAVAMRIAGDRAAFYNCKFIGFQDTLCDDIGNHFFKDCYIEGTIDFIFGNGKSIYLNTEIHSKARAGFAAITAQANELQNNGSGFSFVHCKITGTGNTYLGRAWMPRSRVVFAYTYMDSLVHPAGWYDRGITERAKTVFYGEYKCMGPGANTSKRVSYTKMLTDEEAKPFLNMNFINADSWLRTPPKL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01287 358 SUPERFAMILY Pectin lyase-like 62 353 IPR011050 -
Eupl10g01287 358 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Eupl10g01287 358 FunFam Pectinesterase 58 354 - -
Eupl10g01287 358 Gene3D - 58 356 IPR012334 -
Eupl10g01287 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 353 - -
Eupl10g01287 358 Pfam Pectinesterase 64 349 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01287 Eupl-Chr10 33043868 33046596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01287 14 358 Carbohydrate Esterase AT1G69940 52.113 2.63e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01287 K01051 - msin:131227004 438.728