Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01276 ATGGCCGAATCTTCCTTCGAAATCGACTATTCTTCCTCCCATCGCTCTCGTGGTTATCGCCGCCAACGCCATACAACGCCGGCGAGCTCACGCAACCCATCTCGTTCTCTTACACCAACTGGCTTTCGGAGCCCTGCTCCAAGTAGGCTCCACCACCCTTCTCCCACTCCATTCTATGGTAACGATGACACGTCATGGCAAGGTGAGCTTTCATGGCAATTTGAGCCGACCGGATGGCGCGACAGTCGAAATCTTGGCGCCGCCCTCAGCCCATGGGCCGCCGCCACCCCGTCCAATGCTCGTCGAATATTCCCAAGATCGGCCAATGATTACTACCTCTCTCACACGTCCGGTGGGTACCGCAACTTCACTAATCCATATTATGAATATTCTGGCTACCGTGCACCATCGGAGGGTAGACTCGAGCTTCAGAGCTACGTGGCTGGAGATAATAATGCGACTTCATTTGTTGGAAGGAGTTACATGTATGGTGATAATAGTCGTAAATCGCATGGGTTTTCAAGCTTGGATATTATCAGAGAGAGCAGTGATAGGAACCGTAGTCCTCTAGCTAGCAAGGATGAGCTGAGTATGGTTGATTACGACACACCGGAGGACGTCGAGCGTCAGATTCATATGTTAGAGAATGATCCAAATCGTCGGGTTTCTGTATCACAAGCTTATCATGATGATGATGAGGATGAGGATGACAAGGATGATGACTATGGTCATGGCCATCATCATCGTGGAAGATCTCATCATGTTCATGATCGTCATCAAGGGAGGCAAAAAATGGACAATGATGGTGAGGGTTTAAAACGTCAAAGCTCTCCTTATGGTCATCGTTTTTATGATGGTGGTAATGATAAGTATGATGACGTTGATGGGGTTTCAGCCTTTGATGATGATGAAGAAGATGATGATGATGATGGAAGAGCAACTCAGTCAATTGAGATCACATGCTGGAGAATAGTAGGGGAGAGATCGGCACAGCGTATAAGAACCAAGTACTTAAGGGCAGTTTTGAGACAAGATGTCGGGTTCTTCGACATGGAAGTTAACACCGGCGATATTATGCATGGCATTTCTAGCGATGTTGCACAAATCCAAGAAGTCATGGGGGAGAAGATGGCGCATTTTGTACATCATGTGTTCACCTTCGTCTGCGGTTATGCTGTGGGCTTCCTGAAGTCATGGAAGGTTTCTCTAGTAGTTCTCTCTGTCACCCCATTGATGATGTTTTGCGGGATCGCTTATAAGGCCGTTTACGTCGGTTTAACTGCAAAAGAAGAGGTTTCTTATCGCAAAGCTGGTAATGTTGTGGAGCAAGCAATCAGTTCAGTAAGAACTGTTTTCTCTTTCGTCGGGGAGGATAATTTGACTGCAAAATATGCTGAATTGTTGGAGAAATCAGTGCCGTTTGGGTCCAAGATAGGGTTTGCTAAGGGTGCTGGCATGGGGGTCATTTACTTGGTGACTTACTCGACATGGGCATTAGCTTTCTGGTATGGATCCATCTTGGTTGCTAGGGGAGAGATCACAGGAGGTGAAGCCATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGGGGATTGGCATTGTCACTATCGTATTTTGCGCAATTTGCGCAAGGCACAGTTGCTGCGAGTCGGGTGTTCGAAATCATTGATAGAGTCCCAGAGATTGATCCTTACAACTTTGAGGGAAGAACACTGTCAACTGTTAGAGGGAGGATGGAGTTCAAAGGTGTTAGCTTCGCATACCCATCTCGTCCTAGTGCACAAATCCTCCATTCCCTCAATCTAGTGATCCCACCTTCCAAGACTGTTGCTTTGGTTGGAACCAGTGGGGGTGGCAAGTCCACCATTTTTGCTCTTATAGAGAGGTTCTATGATCCTATCACTGGGACAATCAGCTTGGACGGTCATGATTTAAAGACACTACAAGTGAAATGGCTGAGGGGTCAGATGGGTATGGTGGGCCAGGAGCCGGCTCTCTTTGCCAGCTCAATATTAGAGAATCTGATGATGGGGAAGGAGAACGCGACTAAGAAAGAAGCAATCGCTGCTTGCGTTGCGGCCAATGCCCACAACTTCATCTCTAGCCTCCCCGAAGGCTACGACACTCAGGTCGGTGACCGAGGCATCCAACTCTCCGGTGGCCAGAAGCAACGGATCGCACTAGCTCGAGCGATGATAAAAAACCCCAGAATTCTTCTCTTAGACGAACCCACCAGTGCCTTAGACCCCGAGTCCGAGGCCGTCGTCCAACAGGCCATCGACAAGATCTCCACAGGACGTACAACCATCGTCATTGCCCACCGGCTAGCAACGGTCAGAAATGCACACACCATTGTTGTTCTTGACAGTGGCTCCGTTGTTGAAATCGGTGATCACCGTCAGCTCATGGAACAAACTGGAGCCTACTTCAACCTTGTCAAGCTTGCCTCCGAATCAATCTCGCAACCCGACCCGAAAAAAAATGACATCCGAAATGACACGGATTACTCCATGTACGAGAAATCCATGCACGATATCTCAAGATCGAAGAATGCATATGATATCACGAGATCGAAGTATCGAAAATCCATGCAAGATGAAGAGGAAGAAGATACCGAAGAACAAAAACAAAAACAAAAACCCAAGAAAATTCAACTTTCACAGATATGGAAGTTACAGAGAAAAGAGGTTCCCATGCTCTTATTAGGGTTTTTCTTAGGTATGCTCGCAGGTGCAATTCTCTCTATTTTTCCTCTAATTCTCGGCCAAGCTCTTGAGATCTACTTCAATGACGGCGACACTCGGAAGATGAAGAGAGATATTGGGGTTCTTGCTTTAGCTCTTGTAGGTTTGGGCTTTGGCTCTGTAATCTCCATGACAGGCCAGCAAGGTTTCTGTGGTTGGGCTGGAACAAAACTCACAAAAAGAGTAAGAGACCTACTGTTCCAATCTATACTAAAACAAGAACCTGGTTGGTTCGATTTCGACGAAAACTCAACCGGAGTACTAGTTTCTAGGCTCTCAATCGACTGCATAAGCTTTCGATCGGTTCTCGGTGATCGGTTTTCAGTTTTATTAATGGGTTTGAGCTCAGCTGCTGTGGGACTCATTGTGTCATTCTCTCTTGATTGGAGGCTGACCCTCCTCGCTACCGCTCTCACTCCATTCACACTCGGTGCAAGCTATTTCAGCTTGATTATCAATATGGGACCAAGATTAGATAACAGTTCTTACGCGAAGGCTAGTAATATCGCCGCTGGTGCAGTTTCAAACATAAGAACAGTGACAACATTCTCAGCACAAGAACAATTAGTCTCCTCCTTCGACCGAGCGTTATTGGAGCCGAAGAAGAAATCAATGAGGAGGACACAGATCTTAGGGTTATCACTTGGTTTCTCTCAAGGTGCCATGTATGGAGCTTACACCCTAACGCTCCTTTTTGGTGGTTATCTCATAAAGAAAGATTATTCAAGCTTTGGCGACGTGTACAAGATTTTCTTGATCTTGGTTTTAAGTTCATTCTCAGTTGGACAGTTAGCAGGTCTTGCACCAGACACGTCAAATGCATCGACGGCTGTTCCTGCAGTTTTTGATATAATTAATCGTAGGCCGTTGATCGATGGTGATCGAAAGGGAAGGAAGATTGATGGATCAAGACCGTTTAATATTGAATTCAAGATGGTGACTTTTTCGTATCCATCAAGGCCGGATGTGGTTGTTTTAAGGGATTTTTCATTGAAGGTCAAAGGGGGGACTATGGTGGCTGTAGTTGGGGGAAGTGGGTCTGGAAAGTCAACGGTGATTTGGCTTGTTCAGAGGTTTTATGATCCTAATCAAGGGAAGATTATGATGGGTGGGGTGGATTTGAGGGAGCTTAACCTGAAGTGGTTAAGGATGCAAACAGCTTTGGTAGGGCAAGAGCCTGCACTGTTTGCAGGGACTATAAGAGAGAACATTGCATTTGGAAACCCTAATGCTTCTTGGGCTGAGATTGAAGAAGCTGCCGAGGAAGCTTATATTCACAAGTTCATTACTGGTTTGCCTCAAGGCTATGAAACTCGGGTGGGGGAGAGTGGGGTCCAGTTATCGGGTGGCCAGAAGCAGCGGATTGCGATAGCAAGGGCGATCTTAAAGAAATCAATGATATTGTTGCTGGATGAGGCGAGCAGTGCATTGGACTTGGAATCAGAGAAGCAGGTCCAGGAGGCATTGAGGAAGGTGTCCAGTAGGGCCACCACCATTGTGGTGGCCCACAGACTCTCCACTATCAGAGAGGCTGATCGCATCGCGGTCGTCCGTGATGGTGCACTTGAGGAGTTTGGTAGCCACGATCAACTCATGGCTTCCCATAAGAACGGTGTATACGCGAGCCTGGTTCGGTCTGAGATGGAAGCTAATGCATTCTCCTGA 4410 0.4696 MAESSFEIDYSSSHRSRGYRRQRHTTPASSRNPSRSLTPTGFRSPAPSRLHHPSPTPFYGNDDTSWQGELSWQFEPTGWRDSRNLGAALSPWAAATPSNARRIFPRSANDYYLSHTSGGYRNFTNPYYEYSGYRAPSEGRLELQSYVAGDNNATSFVGRSYMYGDNSRKSHGFSSLDIIRESSDRNRSPLASKDELSMVDYDTPEDVERQIHMLENDPNRRVSVSQAYHDDDEDEDDKDDDYGHGHHHRGRSHHVHDRHQGRQKMDNDGEGLKRQSSPYGHRFYDGGNDKYDDVDGVSAFDDDEEDDDDDGRATQSIEITCWRIVGERSAQRIRTKYLRAVLRQDVGFFDMEVNTGDIMHGISSDVAQIQEVMGEKMAHFVHHVFTFVCGYAVGFLKSWKVSLVVLSVTPLMMFCGIAYKAVYVGLTAKEEVSYRKAGNVVEQAISSVRTVFSFVGEDNLTAKYAELLEKSVPFGSKIGFAKGAGMGVIYLVTYSTWALAFWYGSILVARGEITGGEAIACFFGVNVGGRGLALSLSYFAQFAQGTVAASRVFEIIDRVPEIDPYNFEGRTLSTVRGRMEFKGVSFAYPSRPSAQILHSLNLVIPPSKTVALVGTSGGGKSTIFALIERFYDPITGTISLDGHDLKTLQVKWLRGQMGMVGQEPALFASSILENLMMGKENATKKEAIAACVAANAHNFISSLPEGYDTQVGDRGIQLSGGQKQRIALARAMIKNPRILLLDEPTSALDPESEAVVQQAIDKISTGRTTIVIAHRLATVRNAHTIVVLDSGSVVEIGDHRQLMEQTGAYFNLVKLASESISQPDPKKNDIRNDTDYSMYEKSMHDISRSKNAYDITRSKYRKSMQDEEEEDTEEQKQKQKPKKIQLSQIWKLQRKEVPMLLLGFFLGMLAGAILSIFPLILGQALEIYFNDGDTRKMKRDIGVLALALVGLGFGSVISMTGQQGFCGWAGTKLTKRVRDLLFQSILKQEPGWFDFDENSTGVLVSRLSIDCISFRSVLGDRFSVLLMGLSSAAVGLIVSFSLDWRLTLLATALTPFTLGASYFSLIINMGPRLDNSSYAKASNIAAGAVSNIRTVTTFSAQEQLVSSFDRALLEPKKKSMRRTQILGLSLGFSQGAMYGAYTLTLLFGGYLIKKDYSSFGDVYKIFLILVLSSFSVGQLAGLAPDTSNASTAVPAVFDIINRRPLIDGDRKGRKIDGSRPFNIEFKMVTFSYPSRPDVVVLRDFSLKVKGGTMVAVVGGSGSGKSTVIWLVQRFYDPNQGKIMMGGVDLRELNLKWLRMQTALVGQEPALFAGTIRENIAFGNPNASWAEIEEAAEEAYIHKFITGLPQGYETRVGESGVQLSGGQKQRIAIARAILKKSMILLLDEASSALDLESEKQVQEALRKVSSRATTIVVAHRLSTIREADRIAVVRDGALEEFGSHDQLMASHKNGVYASLVRSEMEANAFS* 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01276 1469 FunFam ABC transporter B family member 4 569 822 - -
Eupl10g01276 1469 SUPERFAMILY ABC transporter transmembrane region 317 563 IPR036640 GO:0005524|GO:0016020
Eupl10g01276 1469 Pfam ABC transporter 1241 1389 IPR003439 GO:0005524
Eupl10g01276 1469 MobiDBLite consensus disorder prediction 860 880 - -
Eupl10g01276 1469 Gene3D ABC transporter type 1, transmembrane domain 1190 1465 IPR036640 GO:0005524|GO:0016020
Eupl10g01276 1469 PANTHER ABC TRANSPORTER B FAMILY 315 815 IPR039421 -
Eupl10g01276 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 571 814 IPR027417 -
Eupl10g01276 1469 MobiDBLite consensus disorder prediction 25 43 - -
Eupl10g01276 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1461 IPR027417 -
Eupl10g01276 1469 Gene3D - 577 844 IPR027417 -
Eupl10g01276 1469 Gene3D - 1212 1463 IPR027417 -
Eupl10g01276 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1223 1459 IPR003439 GO:0005524
Eupl10g01276 1469 CDD ABC_6TM_Pgp_ABCB1_D2_like 910 1206 - -
Eupl10g01276 1469 SMART AAA_5 606 807 IPR003593 GO:0016887
Eupl10g01276 1469 SMART AAA_5 1250 1436 IPR003593 GO:0016887
Eupl10g01276 1469 SUPERFAMILY ABC transporter transmembrane region 881 1207 IPR036640 GO:0005524|GO:0016020
Eupl10g01276 1469 MobiDBLite consensus disorder prediction 1 62 - -
Eupl10g01276 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 815 IPR003439 GO:0005524
Eupl10g01276 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 901 1188 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g01276 1469 ProSitePatterns ABC transporters family signature. 1362 1376 IPR017871 GO:0005524|GO:0016887
Eupl10g01276 1469 CDD ABC_6TM_Pgp_ABCB1_D1_like 317 552 - -
Eupl10g01276 1469 MobiDBLite consensus disorder prediction 296 312 - -
Eupl10g01276 1469 FunFam ABC transporter B family member 1 1213 1463 - -
Eupl10g01276 1469 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1075 1215 - -
Eupl10g01276 1469 CDD ABC_MTABC3_MDL1_MDL2 1223 1460 - -
Eupl10g01276 1469 CDD ABC_MTABC3_MDL1_MDL2 580 816 - -
Eupl10g01276 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 544 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g01276 1469 MobiDBLite consensus disorder prediction 227 312 - -
Eupl10g01276 1469 ProSitePatterns ABC transporters family signature. 718 732 IPR017871 GO:0005524|GO:0016887
Eupl10g01276 1469 Pfam ABC transporter 597 746 IPR003439 GO:0005524
Eupl10g01276 1469 Gene3D ABC transporter type 1, transmembrane domain 314 1189 IPR036640 GO:0005524|GO:0016020
Eupl10g01276 1469 Pfam ABC transporter transmembrane region 900 1172 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g01276 1469 Pfam ABC transporter transmembrane region 317 526 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01276 Eupl-Chr10 32929102 32936582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01276 930 1466 Calmodulin-binding Proteins AT2G36910 37.963 3.26e-106 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01276 K05658 - aew:130761478 1759.19