LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl10g01273	ATGGCGATTCCTTTCTCTCTGCTCACATTCCTGTTTTTCTTCCTTTCTCTCACCACCGCAACCCGTTACGCCACCGCACGAAACGCCAATACGTCACAAGATCTCGTCCACTCATCATGCATTCACGCCAGTTATCCGTATATCTGCATAAAAACACTCTCCTCTTACACGGGCCCCGCTAAAACTCCCAACGATGTCGCTCAAGCAGCCGTGACGATCAGCCTCTCTCGTGCCCGAAGTGTTTCCGGCTATCTCTCCCGACTTGCAAACCCTGGGAACGGGAGCAAGAGAGAACAAATTGCACTGAGTGACTGTGTCGAACAGTTATCTGACTCGGTGGACGAGTTACGTGAAACGCTTTCAGAGCTTCGGCACCTCCGTAGCGGAACGTTTCGGTGGCAGATGAGTAATGCCGAGACGTGGGTCACCGCTGCTTTGACCAACGAGAACACGTGTGTTGATGGGTTTCAGAAGGTTGATGGGAAGGTGAAGACCGATGTTAAGAGGAAGATCACGAACGTAGCCAAGGTTACAAGTAACGCGTTGTATCTTATCAATCGTCTCGATCAGAATCGTGGAAAAGCAGTGGGTGTGGCTGATCCATGA	606	0.5099	MAIPFSLLTFLFFFLSLTTATRYATARNANTSQDLVHSSCIHASYPYICIKTLSSYTGPAKTPNDVAQAAVTISLSRARSVSGYLSRLANPGNGSKREQIALSDCVEQLSDSVDELRETLSELRHLRSGTFRWQMSNAETWVTAALTNENTCVDGFQKVDGKVKTDVKRKITNVAKVTSNALYLINRLDQNRGKAVGVADP*	202

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl10g01273	201	FunFam	Pectinesterase inhibitor 3	31	189	-	-
	Eupl10g01273	201	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	33	188	IPR035513	-
	Eupl10g01273	201	CDD	PMEI-like_3	38	189	-	-
	Eupl10g01273	201	SMART	PMEI_2	31	184	IPR006501	GO:0004857
	Eupl10g01273	201	Coils	Coil	106	126	-	-
	Eupl10g01273	201	NCBIfam	pectinesterase inhibitor domain	5	188	IPR006501	GO:0004857
	Eupl10g01273	201	Gene3D	Invertase/pectin methylesterase inhibitor family protein	30	191	IPR035513	-
	Eupl10g01273	201	Pfam	Plant invertase/pectin methylesterase inhibitor	34	183	IPR006501	GO:0004857
	Eupl10g01273	201	PANTHER	PECTINESTERASE INHIBITOR-LIKE	7	184	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl10g01273	Eupl-Chr10	32897692	32898616	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl10g01273	31	188	Carbohydrate Esterase	AT3G14310	30.488	4.27e-17	77.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl10g01273	-		-	vri:117924846	263.077

Showing 1 to 1 of 1 entries