Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl10g01267 | ATGAAGGCTCCATCAAACGGGTTTCCGGCAAATTCAGGAGAAGGAGATAGGAGCATCAATTCAGAGTTATGGCATGCTTGTGCGGGACCGCTGGTCTCTCTGCCTCCAGTTGGTAGTCTTGTGATCTACTTCCCACAAGGTCACAGCGAACAGGTTGCAGCTTCAATGCAAAAGGATACTGATAGCATCCCAAGCTATCCTAATCTTCCATCAAAGTTGATTTGTGTGCTTCATAATGTCACTTTACACGCTGATGCTGAAACTGATGAGGTTTATGCACAGATGACTCTTCAACCTGCAAATAAATGTGATAAGGAAGCATTACTGGCATCTGATATGGGCCTGAAGCAAAGCAAGCAACCCGCTGAGTTCTTCTGCAAGACACTTACGGCTAGTGACACGAGCACTCATGGTGGATTTTCTGTACCTCGTCGAGCAGCCGAGAAGATCTTTCCACCTCTAGATTTTAACATGCAACCCCCAGCTCAAGAGCTAGTAGCTAGAGACTTGCATGATGTTGCATGGACATTCAGACACATCTTTCGTGGTCAACCAAAAAGGCACCTGCTGACGACAGGTTGGAGCGTGTTTGTTAGCACGAAAAGGCTCTTTGCTAGCGATTCAGTTCTTTTTATAAGAGATGAGAAATCACAGCTTCTCTTAGGAATAAGACGTGCTAATAGACAGCAATCAGCACTTTCTTCATCAGTCATATCCAGTGATAGCATGCATATTGGAATTCTTGCTGCTGCTGCTCATGCTGCCGCAAACAACAGCCCATTTACGATATTTTACAACCCAAGGGCCAGCCCTTCAGAGTTCGTGATTCCCTTAGCCAAGTATAACAAAGCAATGTACACCCAAGTTTCCCCAGGCATGCGATTTAGGATGATGTTCGAGACTGAGGAGTCAGGGGTACGCAGGTACATGGGCACAATCACAGGTATCAGTGATCTGGATCCAGTGCGATGGAAAAATTCGCAGTGGCGCAATCTGCAGGTTGGGTGGGATGAATCAACAGCTGGTGTAAGGCCAAGCCGAGTTTCAATTTGGGAGATTGAGCCTGTTGCAACTCCTTTCTATATATGTCCACCCCCATTATTCAGACCCAAGTTCCCAAAACAACCAGGGATGCCAGATGATGAGTCCGACATGGAGAATGCTTTTAAGAGGGCAATGCCCTGGCTTGGAGATGACCTTGGCATCAAGGATGCTCAAAGTCCAATCTTCCCGGGCTTGAGTCTGGTCCAGTGGATGAGCATGCAACAGAACCCTCATTTCTCAGCTGCTCAGACAGGATTTTTCCCATCCATGGTTTCCTCAGCTTCCTTGCATAATAACCTCAGCACTGATGACCCATGCAAGATACTGAACTTTCAATCCCATGCTTTACCTGCGCCGAATTTCCAGTTAAACATTCCCAAAACAAATCAACAAAACCAAGTGGACCAGTTTCAGCAAACAACTCTCACATGGCCCCAGCAGCAGCGGCAGACTCCTATTAATCCACAACAGCAGCAACAACAAAAGCAACCGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACTGCAACTGCAACAGCAACAGCAACAGCAACAGCAACTGCAACTGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCTGCAGCAGCAGCAACAACAGACACATCAGCAACAACAACAACAGCTGCTGCTGCAGCAGCAGCAGCAACAACAGACACATCAGCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAAAAACAACAACAACAGCTACTGCGACCAGCGCTTATTAATAATGGTGTAGTTGCTCCAACCCAGACTCCTAACCAAAATTTGCATCAACCAATCACCTACTCTCAGCTTCAGCAAAAGCAGTTACTCACACCCAACAACCAATTCCAACAAAATCTCCATTCCCCCAACCAGAATCCCCTCCAAGCGGCATCTTTACCACAAGACTTGCAGTTCCAGCGACAACTGGAACAGCAACAGAGTCTCTCACAAAGGCAGCAGCAGCAGCAGCCACAGATGCAACAGTTGCCACTATCCCATCATCAACTTCAGCTACAGTTGCTGCAGAAGTTGCAGCAACAGCAACAGCAAGAGTTGCTCTCCCAGGTTAGCCCACGTTTGCAACCTCAGCTGCCACAACAACAGCAGGTTCATCAACAAAACCAGCAATTTCAACAACAGCAGCCTTTGCAGCAGCAGCAGCAACAACAACTTAGCACCACCACAAACTTCTCTCCATCTCCCCTAAACCAACCACAACAGTTCCACACGAACCATATCCTGAGCCAGCAAAATCCACCTGTGCCCATCAGAACTCATTCTGGTCTCACCGATGGAGATGCGCCATCATGTTCGACCTCGCCTTCTACTAATAACTGCCAGGTTTCTCCGTCGAGCTTCTTGAACAGAACCCATCAAGCCCCGGCTATATTTGTGGATGATACGGTGGTTCAACCTGCAAGTAATTTGGTTCAAGAGCTTCAAAGCAAATCTGATGTTCGGATCAAACATGAATTGCCCAATTCAAAAGAACCTGACCAACTTGTATATAGAGGTGCCATTACAGATCCACTGGAAGCATCCTCATCCGCAACCTCATATTGTTTGGATGGTGGTGGCCTCCAGCAAAATTTCTCACTGTCTAACTTTTGTTTAGACGGGGAAGTGCAAGCAGATCCTCGGAATAATCTTCTCTTTGGAGTTAATATTGATGGTTTGACACCAGATACTTTGTTGTCAAGGGGGTTTGGTTCTGGGAAGGATCTTCAAAACTTGCTTTCTACTTATGGTGGTACTCCGAGAGATATTGAGACGGAGTTATCTACTGCAGCAATCAGTTCTCAGTCGTTTGGAGTGCCCGAAATGTCATTCAAGCCCGGTTGTTCTACTGATGCAGCCATCAACGAGAATGCAGTTTTGAATAGGGGCTTGTGGGCTAACCAGACGCCTCAGCGTATGCGGACATTCACGAAGGTTCATAAGCGAGGCTCTGTGGGAAGATCTATAGATGTGACCCGTTACAAGGGGTATGACGAGCTCAGGCAAGATCTGGCTCGCATGTTTGGAATTGAAGGGCAACTAGAAGATCCACACAGAACTGAATGGAAACTGGTTTATGTTGATCATGAAAATGACATTCTACTTGTGGGAGATGACCCCTGGGAGGAGTTTGTAAGTTGTGTCCAGAGCATCAAGATATTGTCGTCTGCTGAAGTTCAGCAGATGAGTTTGGATGGGGATCTAGGAAATGTGCAATTACAGAATCAGGCTTGCAGTGGTTCTGGTAGTGGGAATGGCTGGAAGGGACAGTATGATGACAATTCAGCTGCATCTCTTTGA | 3405 | 0.4681 | MKAPSNGFPANSGEGDRSINSELWHACAGPLVSLPPVGSLVIYFPQGHSEQVAASMQKDTDSIPSYPNLPSKLICVLHNVTLHADAETDEVYAQMTLQPANKCDKEALLASDMGLKQSKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFNMQPPAQELVARDLHDVAWTFRHIFRGQPKRHLLTTGWSVFVSTKRLFASDSVLFIRDEKSQLLLGIRRANRQQSALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSPGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGVRPSRVSIWEIEPVATPFYICPPPLFRPKFPKQPGMPDDESDMENAFKRAMPWLGDDLGIKDAQSPIFPGLSLVQWMSMQQNPHFSAAQTGFFPSMVSSASLHNNLSTDDPCKILNFQSHALPAPNFQLNIPKTNQQNQVDQFQQTTLTWPQQQRQTPINPQQQQQQKQPQQQQQQQQQQQQQQQQQQQQLQLQQQQQQQQQLQLQQQQQQQQQQQQQQQQLQQQQQQTHQQQQQQLLLQQQQQQQTHQQQQQQQQQQQQQKQQQQLLRPALINNGVVAPTQTPNQNLHQPITYSQLQQKQLLTPNNQFQQNLHSPNQNPLQAASLPQDLQFQRQLEQQQSLSQRQQQQQPQMQQLPLSHHQLQLQLLQKLQQQQQQELLSQVSPRLQPQLPQQQQVHQQNQQFQQQQPLQQQQQQQLSTTTNFSPSPLNQPQQFHTNHILSQQNPPVPIRTHSGLTDGDAPSCSTSPSTNNCQVSPSSFLNRTHQAPAIFVDDTVVQPASNLVQELQSKSDVRIKHELPNSKEPDQLVYRGAITDPLEASSSATSYCLDGGGLQQNFSLSNFCLDGEVQADPRNNLLFGVNIDGLTPDTLLSRGFGSGKDLQNLLSTYGGTPRDIETELSTAAISSQSFGVPEMSFKPGCSTDAAINENAVLNRGLWANQTPQRMRTFTKVHKRGSVGRSIDVTRYKGYDELRQDLARMFGIEGQLEDPHRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVQLQNQACSGSGSGNGWKGQYDDNSAASL* | 1135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl10g01267 | 1134 | Pfam | AUX/IAA family | 1006 | 1095 | IPR033389 | - | |
Eupl10g01267 | 1134 | Pfam | Auxin response factor | 251 | 333 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 676 | 699 | - | - | |
Eupl10g01267 | 1134 | ProSiteProfiles | B3 DNA-binding domain profile. | 125 | 227 | IPR003340 | GO:0003677 | |
Eupl10g01267 | 1134 | FunFam | Auxin response factor | 1004 | 1098 | - | - | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 1114 | 1134 | - | - | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 732 | 821 | - | - | |
Eupl10g01267 | 1134 | ProSiteProfiles | PB1 domain profile. | 1009 | 1102 | IPR000270 | GO:0005515 | |
Eupl10g01267 | 1134 | Pfam | B3 DNA binding domain | 125 | 226 | IPR003340 | GO:0003677 | |
Eupl10g01267 | 1134 | CDD | B3_DNA | 124 | 225 | IPR003340 | GO:0003677 | |
Eupl10g01267 | 1134 | Coils | Coil | 516 | 577 | - | - | |
Eupl10g01267 | 1134 | Gene3D | - | 1004 | 1098 | - | - | |
Eupl10g01267 | 1134 | Gene3D | - | 288 | 359 | - | - | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 492 | 512 | - | - | |
Eupl10g01267 | 1134 | Coils | Coil | 581 | 610 | - | - | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 732 | 793 | - | - | |
Eupl10g01267 | 1134 | Gene3D | - | 123 | 226 | IPR015300 | - | |
Eupl10g01267 | 1134 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 17 | 1098 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Eupl10g01267 | 1134 | SUPERFAMILY | CAD & PB1 domains | 1024 | 1087 | - | - | |
Eupl10g01267 | 1134 | MobiDBLite | consensus disorder prediction | 800 | 821 | - | - | |
Eupl10g01267 | 1134 | FunFam | Auxin response factor | 288 | 360 | - | - | |
Eupl10g01267 | 1134 | SMART | B3_2 | 125 | 227 | IPR003340 | GO:0003677 | |
Eupl10g01267 | 1134 | FunFam | Auxin response factor | 123 | 227 | - | - | |
Eupl10g01267 | 1134 | SUPERFAMILY | DNA-binding pseudobarrel domain | 115 | 254 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl10g01267 | Eupl-Chr10 | 32805539 | 32818588 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl10g01267 | 1 | 476 | B3 DNA Binding Superfamily | AT1G19220 | 81.761 | 0.0 | 804 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3-ARF | Eupl10g01267 | AUX_IAA | 9.7e-10 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl10g01267 | K14486 | - | nnu:104600495 | 888.256 |