Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01264 ATGGTGAAACCGACAACTGGAAAACATACGACTGAGAGAACTGAGAGAAACGATTCTCAGAAGTATAAGGGAGTTAGAAAGAGGAAGTGGGGGAAATGGGTGTCAGAAATCCGGCTACCAAACAGTCGGGAACGAATATGGTTGGGATCTTACGAGACACCGGAAAAAGCGGCAAGGGCTTTCGACGCTGCTCTCTTTTGCTTACGTGGCAGGGGAGCCAAGTTCAATTTCCCAGATAACCCGCCTGAGATTGCTGGTGCTGGGTCACTCAAGCCACTGGAAATTCAAGCCGCTGCAGCTCGTTTCGCTAATGAGGAACCACCGAAAGTTCGTTTGAGTAGTTTACCTTCGGAAGTCCCATTAGAATATTCGTCGCCGCCGTCGGTTTCTGGTGAGCCGGTTCCGGCAGATAGCGATCTGACGATGGATTGGCCATTCTTGGATTTGTTGACGATGTCAGGTTCAGGCGATAGTGTGTCAGATTTCGGTGTTTATTCGGGGATCGACGATTTCCCCGGAGAATATATGCCGCCACCGCCGGAGGTTGATTTGAAGGAAAATGGTGAAGGGGTTTTTTCTCAGGAGTCTTTTCTTTGGAATTTCTGA 606 0.4917 MVKPTTGKHTTERTERNDSQKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYETPEKAARAFDAALFCLRGRGAKFNFPDNPPEIAGAGSLKPLEIQAAAARFANEEPPKVRLSSLPSEVPLEYSSPPSVSGEPVPADSDLTMDWPFLDLLTMSGSGDSVSDFGVYSGIDDFPGEYMPPPPEVDLKENGEGVFSQESFLWNF* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01264 201 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 MobiDBLite consensus disorder prediction 106 134 - -
Eupl10g01264 201 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 MobiDBLite consensus disorder prediction 1 27 - -
Eupl10g01264 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 120 - -
Eupl10g01264 201 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Eupl10g01264 201 CDD AP2 20 80 IPR001471 GO:0003700|GO:0006355
Eupl10g01264 201 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Eupl10g01264 201 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01264 Eupl-Chr10 32778932 32779975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01264 21 201 AP2-EREBP Transcription Factor Family AT1G19210 52.128 2.24e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl10g01264 AP2 2.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01264 - - nnu:104600498 245.743