Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01263 ATGGTAAAGCTCTCAACTGGTAGGCCACAAAGAACTGAGAGAAGGGATTACGCCATTAACGGCGGTAACCGCCGTTACAAGGGTGTGAGGATGAGAAAATGGGGTAAATGGGTCGCCGAAATTCGACTCCCAAATAGCCGAAACAGAATCTGGTTAGGGTCTTACGAAACGCCTGAGAAGGCAGCGAGAGCTTACGACGCAGCCGTGTTTTGCATACGTGGACCATCGGCGAAGATCAATTTCCCAGCCACACCACCGGAGATCCCATCAGCTGGAGACCTGACACCGACACAGATTCAAGCCGCAGCGTCGAGGTACGCACACGAGGATCCTGTAGTGGTGGTGGTGGAGGAAACAGAAGCACCACCGCCTGTGACATCGATTTCGTCAACATCGTCAGTAGTTAACTCGAGTTTGACAGAATTTCCAATGGATTTCACATTTTCGATGATGGATTCCACCGATATATTCCCTTCTTCCTTTGATTGGTATCCTGGGGAGAGTTATTTTTCGGCGGAGGAGAGAGGCGAAGAAGGGGTGGAGGAAACCATTACTGGCGGCGCATTTTATCAGTTTCCGCTGTTCTGGTAG 591 0.5059 MVKLSTGRPQRTERRDYAINGGNRRYKGVRMRKWGKWVAEIRLPNSRNRIWLGSYETPEKAARAYDAAVFCIRGPSAKINFPATPPEIPSAGDLTPTQIQAAASRYAHEDPVVVVVEETEAPPPVTSISSTSSVVNSSLTEFPMDFTFSMMDSTDIFPSSFDWYPGESYFSAEERGEEGVEETITGGAFYQFPLFW* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01263 196 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Eupl10g01263 196 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Eupl10g01263 196 CDD AP2 25 84 IPR001471 GO:0003700|GO:0006355
Eupl10g01263 196 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Eupl10g01263 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01263 Eupl-Chr10 32773926 32774936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01263 1 171 AP2-EREBP Transcription Factor Family AT1G74930 44.068 1.94e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl10g01263 AP2 8.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01263 - - nnu:104609294 197.593