Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01257 ATGTCGAGTTCGCCAGATTTCTCAGAGGTCGAGAGGCTTCCAGGCTGGAAAACGGTGAGACCGCTGGAGAAGTCGAATTTCTCTCAGACGTGTAGTCTGTTGAGACAGTATTTGAAGGACAATGGGAGTTTCGGAGATCTGAGCCTTGGGATAACTTGCAATCTAGAAGGAAAAGGGAAATCCGAAACGTTTCGTCAAACAGCGAACACCATGAATTTGTTACCTAACATGGAAATACCGGGAGATGTATCGGGAGTTTCGGACCGTAGCACTGTGAACTCGTCTCGTAATGGGAAATCCATGTATTTGCTTCCTCAACATGCCAGTTATGGTCCTTCTTCCGTTCCTACGGAAGACATCTCAAAGAAAACCGATTTCAGGCAGGCAGTGACGGAGCCGGAAACCGCCCAAATGACTATATTTTATGCCGGAAAAGTACTTGTGTTTGACGATTTTCCGGCAGACAAGGTGAAGGAAGTCATGCTCTTAGCTAGCAAGGGAAACTCACAGAATACCGGCAGCTTCCCTTCTATTTCCACCAAGGAACAAATCAATCCTCCTGGATTCGCAGCTTCCGGGAACAATTCGACCCAAGAACGCCTTCAAAAGCCTCCTCAACCCAATGTTTCAGATCTCCCAATTGCAAGAAAAGCTTCGCTCCATCGGTTTTTGGAGAAGAGAAAAGATAGGATTAATGCAAGAGCACCATACGAAGTAAACAACTCGGCTGCAGCTCCCGCGAAACCAGCGGATAGCCAGACGTGGCTCGGCTTGGCGTCACAGGCTTCCTAG 792 0.4798 MSSSPDFSEVERLPGWKTVRPLEKSNFSQTCSLLRQYLKDNGSFGDLSLGITCNLEGKGKSETFRQTANTMNLLPNMEIPGDVSGVSDRSTVNSSRNGKSMYLLPQHASYGPSSVPTEDISKKTDFRQAVTEPETAQMTIFYAGKVLVFDDFPADKVKEVMLLASKGNSQNTGSFPSISTKEQINPPGFAASGNNSTQERLQKPPQPNVSDLPIARKASLHRFLEKRKDRINARAPYEVNNSAAAPAKPADSQTWLGLASQAS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01257 263 Pfam tify domain 132 165 IPR010399 -
Eupl10g01257 263 SMART tify_2 131 166 IPR010399 -
Eupl10g01257 263 MobiDBLite consensus disorder prediction 242 263 - -
Eupl10g01257 263 MobiDBLite consensus disorder prediction 168 205 - -
Eupl10g01257 263 ProSiteProfiles Tify domain profile. 131 166 IPR010399 -
Eupl10g01257 263 MobiDBLite consensus disorder prediction 168 211 - -
Eupl10g01257 263 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 249 IPR040390 -
Eupl10g01257 263 Pfam Jas motif 213 237 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01257 Eupl-Chr10 32703270 32706749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01257 1 261 Tify Gene Family AT1G19180 42.909 4.33e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl10g01257 tify 8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01257 K13464 - nnu:104600505 285.419