Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01245 ATGGCGCCTGAATCGAACTCTACAGAAGGATTTGAAGTAGAGAGCTCTCTGCAATCTATCTGCTACAAGCGGGGTTCACTTCGGCTACTCGATCAGACAAGGCTTCCCCTCGAAACTGTGTATTTCAACGTTCAAGATGCTACTGATGGATGGAATGCAATAAGGGATATGGTGGTCCGCGGAGCACCAGCAATTGCTATATCAGCAGCCCTCTCCCTGGCTGTAGAAGTGGTTAACTTGGAACCCTTTGATGGGACATCTGAGGATGCAGCTACTTTCCTTGCCTTGAAATTGGAATACCTTGTCTCTAGCCGACCAACTGCTGTAAACCTTTCAGATGCTGCAGGAAAGCTTAAAGATGTTGTATCAAAGGCTGCTGCCACTTCTGCAGAAGCCAGATCTGTTTTTAAGGCCTACGTAGAAGCTGCTGAAACCATGCTCAAGGATGATGTTGCTTCAAACAAAGCAATAGGGTCCTATGGAGCAAGCTTTCTTCAGCATCAGCTGAAGGACTCAAAGAGGCTGTCTATCTTAACCCATTGCAACACTGGCAGTCTTGCAACAGCTGGATATGGTACTGCCCTGGGTGTTATCCGTGCACTCCATACTGAAGGAGTTCTTGAAAGGGCCTTTTGCACAGAAACACGACCATTTAACCAGGGATCCAGGCTTACGGCCTTTGAGTTGGTTCATGATAAGATACCCGCCACATTAATAGCAGATTCTGCAGCAGCTGCATTAATGAAAGCTGGACGTGTTGATGCGGTCATTGTTGGAGCTGACCGTGTGGCTGCTAATGGTGACACTGCTAATAAGATTGGAACCTACAGCCTTGCCCTTTGTGCATTACATCATGGCATTCCATTTTATGTGGCTGCACCTGTGACTTCTATTGACCTATCCCTTCCCTCTGGACAAGAAATCGTTATTGAGGAAAGATCTGCAAAGGAGCTGTTGCATTCTCGTGGGGGACTTGGGGAGCAAGTGGCCGCATCTGGGATCTCTGTTTGGAATCCGGCTTTTGACGTTACCCCTGCTAATCTGATAACTGCTATTGTTACAGAGAAGGGGGTCATCACAAAGGCTGGGACTGATGCCTTTGACATAAAAGTTTTTGTACAAAGGGCACCTGGTTGCACTGCTGAATAA 1149 0.4726 MAPESNSTEGFEVESSLQSICYKRGSLRLLDQTRLPLETVYFNVQDATDGWNAIRDMVVRGAPAIAISAALSLAVEVVNLEPFDGTSEDAATFLALKLEYLVSSRPTAVNLSDAAGKLKDVVSKAAATSAEARSVFKAYVEAAETMLKDDVASNKAIGSYGASFLQHQLKDSKRLSILTHCNTGSLATAGYGTALGVIRALHTEGVLERAFCTETRPFNQGSRLTAFELVHDKIPATLIADSAAAALMKAGRVDAVIVGADRVAANGDTANKIGTYSLALCALHHGIPFYVAAPVTSIDLSLPSGQEIVIEERSAKELLHSRGGLGEQVAASGISVWNPAFDVTPANLITAIVTEKGVITKAGTDAFDIKVFVQRAPGCTAE* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01245 382 FunFam Methylthioribose-1-phosphate isomerase 173 370 - -
Eupl10g01245 382 Gene3D - 208 373 IPR042529 -
Eupl10g01245 382 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
Eupl10g01245 382 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 367 IPR005251 -
Eupl10g01245 382 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 45 361 IPR011559 GO:0044249
Eupl10g01245 382 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237
Eupl10g01245 382 FunFam Methylthioribose-1-phosphate isomerase 15 207 - -
Eupl10g01245 382 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 15 374 - -
Eupl10g01245 382 Gene3D - 15 207 IPR027363 -
Eupl10g01245 382 SUPERFAMILY NagB/RpiA/CoA transferase-like 17 362 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01245 56 378 Eukaryotic Initiation Factors Gene Family AT2G05830 76.780 5.27e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01245 K08963 - nnu:104600518 598.586