Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01244 ATGGGTCACTCGAACGTCTGGAATTCTCATCCGAAGAGCTACGGCCCTGGATCTCGTGCCTGCCGTGTTTGTGGCAACCCGCATGGGTTGATCAGGAAGTATGGACTCATGTGTTGCAGGCAGTGCTTCCGCAGCAACGCCAAGGAGATTGGTTTCATCAAGATACAAATTTTTGTTTCATTTTTAGGAACCAACAAAATTATTTATAGGACATATCTGGGATACTTGGAGAAGTTGGGAAATTCTGTCTTCCACAGTCCTATGTTGTATATCACTCGTGCAAGGCTAAACGTTCTATTCGATGGTCCAGCATCTGAACATATTATTATCCAAATGCTGGAAGGAGTATCTGTTGACTTTCTTGTAGATGAGAGGGAGAGAAGTTCTCGCCAACAACATGCAGTCATTGGTGAGGAGAAGGCGGGTAACACGGGGCCCACTCCTGGAGGTCTTGACCCCCAGGCTTTTGTTAGTGATGGCTTCAGCTTGCATTGTTTTAGAGAAGGTCTCAACACAAAGGATGAAGAGGAGAGCTTGAATAAGCTAGGATTCAAGAAGATTAGCAACGACAAGGTGCAGAATCTGCAGATTGCTGGGATTCTGGCCGTCAAACTAGGCCAGTGGGAGATTCAGGTGAGGCTGGGATGA 648 0.466 MGHSNVWNSHPKSYGPGSRACRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKIQIFVSFLGTNKIIYRTYLGYLEKLGNSVFHSPMLYITRARLNVLFDGPASEHIIIQMLEGVSVDFLVDERERSSRQQHAVIGEEKAGNTGPTPGGLDPQAFVSDGFSLHCFREGLNTKDEEESLNKLGFKKISNDKVQNLQIAGILAVKLGQWEIQVRLG* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01244 215 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Eupl10g01244 215 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
Eupl10g01244 215 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
Eupl10g01244 215 FunFam 40S ribosomal protein S29 1 56 - -
Eupl10g01244 215 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01244 Eupl-Chr10 32516688 32521528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01244 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 89.286 1.43e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01244 K02980 - egr:120294614 125.561