Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01220 ATGACCATTGGAGAACCAGACCCAAATTCCACCTCTGATCACATCTTAGACTGGTTGGAAGATACTGTGTCGTTCATCCCATCATTCCTCGATGATCCTTATAACGCCGGGGAGATTAACGGGTATCAATGGTGGGATCACGAACAAGATCTGATCGATGCTACTTCTTCTCTCAACAGCACCATCACGACCGCCACCACCCCCACCCCCACCCCCACCACCACCACCACCACCACCACCACCACTACTACTACTACTACTCCTGACCTCACCAGTCCTTCACCGCCGTCCGATTCGTCTAAGAAACGAAAACTACCCAGGGCCAACAACCCAAATCCCAAAACATCCCAAATTCATCATCAACAACAATACCAGCGTCGTCGGATGAGCGAAATCGATGAAGGCGATACAGTGGTGGAAGAAACAGTGGTGGTGAAGAGAGCGACGGGTACGAAGAAACCTACAGCTAAAGGTACAGGGAATACCTGTAATAACGGTAATAACAAGGAAGGGAGATGGGCTGAGCAGTTACTTAATCCTTGTGCTGTTGCTATCACCACCGGAAATCTGACACGCGTGCAACACCTCTTGTATGTCCTCCACGAGCTCGCTTCCCCCTCCGGCGATGCCAACCACCGGCTTGCTGCTCACGGCCTCCGCGCGCTGACCCACCATCTCTCATCCAGTTCATCATCGTTGCCAATCACTTTCTCTTCAACAGAGCCGCGGCTGTTCCAACGGTCTCTACTCAAATTCTACGAGGTCAGTCCATGGTTCGCCTTCCCCAATACAATCGCCAATGCTTCAATTCTCCAAATTCTAACCCAAGAACCAGATCGTTCGCGCAATCTTCACATTCTCGACATCGGAGTCTCTCACGGCCTCCAATGGCCGACACTACTCGAGGCCTTGAGCCACCGATCCGGTGGACCTCCTCCTCTTCTTCGCCTCACAATCGTCGCCCCCACCAACACTGCTGCTCCATTCTCCATGGGCCCACCTGGTGACGATTTCCCCTCTCGTCTTCTCAGATTCGCCAAATCCATTGACCTCAACCTCCAAATCAACCGCCTCGACAACCACCCTTTACAAACACTAACCCCCCAATTGATCAACACCTCCCCAAATGAAACCTTAATTGTCTGCGCACAATTCAGACTCCACCACTTGAATCACAACACCCCAGATGACAGAATCGAATTCTTGAGAGTTCTAAGAAATTTCGAGCCGAAAGCCGTGATTTTAAGCGAGAACGACATGGATTGTAGCTGCAACCATTGCGGGGATTTCTCGACAGGGTTCTCAAGGAGAGTGGAGTACTTATGGAGGTTCTTGGACTCGACAAGTTCAGCGTTCAAAGGTAGAGAATGCGAGGAGAGACGGGTGGTGGAAGGAGAGGCAGCGACGGGATTGATGAACAGGGCAGAGATGAATGAAGGAAAGGAGAGATGGTGTGAGAAGATGAGAGGAGTTGGGTTCATGGGAGAGGTATTTGGAGAAGACGCCATTGATGGAGGTCGAGCTCTGTTGAGGAAGTATGATTCTAACTGGGAGATGAGAATGGATGAGAGAGATGGGTGCGTGTGTTTGTGGTGGAAAGGTCAGCCCATCTCGTTTTGCTCGTTATGGAAGTTGGAGAAGAGTATAGTGTAA 1653 0.5076 MTIGEPDPNSTSDHILDWLEDTVSFIPSFLDDPYNAGEINGYQWWDHEQDLIDATSSLNSTITTATTPTPTPTTTTTTTTTTTTTTTPDLTSPSPPSDSSKKRKLPRANNPNPKTSQIHHQQQYQRRRMSEIDEGDTVVEETVVVKRATGTKKPTAKGTGNTCNNGNNKEGRWAEQLLNPCAVAITTGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRALTHHLSSSSSSLPITFSSTEPRLFQRSLLKFYEVSPWFAFPNTIANASILQILTQEPDRSRNLHILDIGVSHGLQWPTLLEALSHRSGGPPPLLRLTIVAPTNTAAPFSMGPPGDDFPSRLLRFAKSIDLNLQINRLDNHPLQTLTPQLINTSPNETLIVCAQFRLHHLNHNTPDDRIEFLRVLRNFEPKAVILSENDMDCSCNHCGDFSTGFSRRVEYLWRFLDSTSSAFKGRECEERRVVEGEAATGLMNRAEMNEGKERWCEKMRGVGFMGEVFGEDAIDGGRALLRKYDSNWEMRMDERDGCVCLWWKGQPISFCSLWKLEKSIV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01220 550 MobiDBLite consensus disorder prediction 62 133 - -
Eupl10g01220 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 147 532 IPR005202 -
Eupl10g01220 550 MobiDBLite consensus disorder prediction 62 99 - -
Eupl10g01220 550 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Eupl10g01220 550 MobiDBLite consensus disorder prediction 109 123 - -
Eupl10g01220 550 Pfam GRAS domain family 175 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01220 Eupl-Chr10 32266145 32268249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01220 8 544 GRAS Transcription Factor Family AT3G13840 49.174 7.20e-175 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl10g01220 GRAS 2.7e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01220 - - vvi:100261706 748.429