Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01218 ATGGCACTCTGTTTCAAGTTTGAGCGAACGGACGGGTTTCACCTGCGAGTGCTTGTTCTTCTGGTTTTTCTCCAAGCTTTGAGCTTATGTCGTGCTGATACGGACGACGGAGCAACACTTTTGGAGGTCAAGAAGTCTTTTCACAACGTCGATAATCTGTTATATGAGTGGACGGATTCTTCGGATTACTGTTTTTGGAGAGGGGTGACTTGTGACAATGTGACCTTCAATGTCATTGCACTTAATTTGTCGGGTTTAAATCTCGATGGTGAAATCTCGCCTGCAATTGGAGATCTGAAAAGCCTACTCTCAATTGATCTTAAGGAAAACCGTCTCTCAGGACAGATACCAGACGAGATTGGCGACTGCTCATCTCTGAAAAGCCTGGATTTGTCCTTCAATGAGATTTACGGGGACATACCGTTTTCAATTTCAAAGTTGAAACAATTAGAATTCCTAAATTTGAAAAATAACCAGTTGATTGGACCCATTCCTTCGACATTGTCTCAGATTCCAAACTTGAAAATCTTGGACCTGGCCCAAAATAAATTGACTGGGGACATACCTAGGCTTATTTATTGGAATGAAGTTCTACAGTATCTGGGACTGCGAGGGAACAATTTGATAGGGATTCTCTCTCCTGATATGTGCCAGTTAACTGGGTTGTGGTACTTTGATGTAAGAAATAACAGCCTTACTGGGATCATTCCTCAAAATATTGGCAACTGTACTGGCTTCCAGGTCTTGGACTTGTCCTACAACCAGTTCACTGGAGAGATTCCGTTCAACATTGGGTTTTTGCAAGTAGCTACACTATCTCTGCAAGGAAACCGACTTACTGGGAAAATTCCATCTGTGATTGGTCTCATGCAGGCACTTGCTGTGCTAGATCTGAGCTGCAACCTCTTGAGTGGGCCCATTCCCCCCATTTTAGGCAATTTGACTTACACGGAGAAATTGTACTTGTATGGTAACAAGCTTACAGGATCCATTCCCCCTGAACTGGGAAACATGACAAAGCTCCACTATCTGGAACTGAATGATAATCAGCTCAGTGGGCATATTCCATCTGAGCTTGGGAAGCTCACCGACTTATTTGACCTGAATGTTGCTAATAACTATCTTGAAGGTCCGATTCCAGATAATCTTAGCTCATGTACGAATCTCAATAGCCTCAATGTGTACGGCAATAGATTGAAAGGAACCATCCCACCTGCCTTTGAAAGGCTTGAGAGTATGACATACTTGAATCTTTCATCGAATAATCTCAGAGGTCCAATCCCTATTGAGCTATCCTGGATTGGTAATTTGGATACCCTGGACCTTTCAAATAACATGATTTCTGGTTCCATTCCTTCTTCAGTTGGTGACTTGGAACATCTTCTGAAACTAAATTTAAGCAAGAACCGTTTGGCTGGATACATTCCGGCAGAGTTCGGAAATCTGAGGAGTGTCATGGAGATAGACCTTTCAAATAATCACCTCTCGGGCCCAATTCCTCAGGAACTTGGTCAGCTACAAAATTTGTTCTCACTGAGAGTAGAACACAACAACTTATCAGGGGATATACTATCACTCGTCAACTGCTTCAGTCTTACTGTCCTAAATGTATCTTACAACAATCTAGCTGGTGATATACCCGTGGGGAACAACTTCTCAAGGTTTCTGCCTGGTAGCTTCATAGGAAATCCTGGTCTTTGTGGCTATTGGCTCAATTCTCCATGTCACACATCTCATCCATCAGATCGAGCTGCAATCTCTAAAGCAGCGATTCTAGGAATTGCTTTGGGCGCCCTTGTGATCCTTCTGATGATTTTAGTAGCTGTGTGCCGACCGCATAATCCAACACCTTATCCAGAAGGATCTCCAAACAAACCAGTCAGCTATATCTCACCAAAGCTGGTGATCCTCCACATGAACATGGCTCTTCATGTGCATGAGGACATCATGAGGATGACTGAGAATCTGAGTGAGAAGTATATCATTGGGTCTGGTTCGTCGAGCACAGTGTACAAGTGTGTGCTGAAGAACTGCAGGCCGGTGGCAATCAAGAGGCTATACTCTCACTACCCACAAAGCCTGAAGGAATTTGAGACTGAGCTCGAGACTGTTGGAAGCATCAAGCATCGGAATCTGGTCAGCCTCCAAGGGTACTGCTTGTCTCCCTCTGGGAACCTTCTCTTCTATGACTACATGGAGAATGGTAGCCTCTGGGATCTCCTACATGGCCTTACAAAGAAGAAGAAGCTGGACTGGGATACCCGCCTTCGAATAGCACTTGGAGCGGCTGAAGGACTGGCGTATCTCCATCATGACTGTAGCCCACGTATAATCCATAGGGATGTGAAGTCATCTAACATACTCTTGGATAAGGATTTCGAGGCCCATCTTACTGACTTCGGCATTGCCAAGAGCTTAAGTGCGTCCAAGTCCCACACCTCCACCTACATTATGGGTACCATCGGCTACATAGATCCTGAGTATGCCCGCACCTCCCGCCTTACTGAGAAGTCTGATGTCTACAGCTATGGGATTGTCCTGCTTGAGCTGCTGACAGGAAGGAAAGCAGTAGACAACGACTCGAATCTCCATCAATTGATTATGTCCAAGACTGCCAACAATGCTGTTATGGAGACTGTTGATCCTGATATCTCTGCCACTTGTAAAGATCTCGGAGTTGTAAAGAAGTTATTCCAGCTGGCCCTTCTCTGCACCAAGAGACAGCCCTCCGATCGGCCGACAATGCACGAGGTGACACGTGTCCTCGAGTCCCTGTTGTTGTCCACTGCCCCAAAGCAGCCAACCCCACTTCCGCCACCACCTCAGCTACTTGCCAAGGTGCCGAGCTACATGGAAGAGTATGCCAATCTGAAGAACCCGAACGCGATAAACTGCACATCCCTGAGCACCTCAGATGCTCAACTCTTCCTGAAATTCGGAGAGGTGATATCTCAGAACAGTGGGTGA 2967 0.456 MALCFKFERTDGFHLRVLVLLVFLQALSLCRADTDDGATLLEVKKSFHNVDNLLYEWTDSSDYCFWRGVTCDNVTFNVIALNLSGLNLDGEISPAIGDLKSLLSIDLKENRLSGQIPDEIGDCSSLKSLDLSFNEIYGDIPFSISKLKQLEFLNLKNNQLIGPIPSTLSQIPNLKILDLAQNKLTGDIPRLIYWNEVLQYLGLRGNNLIGILSPDMCQLTGLWYFDVRNNSLTGIIPQNIGNCTGFQVLDLSYNQFTGEIPFNIGFLQVATLSLQGNRLTGKIPSVIGLMQALAVLDLSCNLLSGPIPPILGNLTYTEKLYLYGNKLTGSIPPELGNMTKLHYLELNDNQLSGHIPSELGKLTDLFDLNVANNYLEGPIPDNLSSCTNLNSLNVYGNRLKGTIPPAFERLESMTYLNLSSNNLRGPIPIELSWIGNLDTLDLSNNMISGSIPSSVGDLEHLLKLNLSKNRLAGYIPAEFGNLRSVMEIDLSNNHLSGPIPQELGQLQNLFSLRVEHNNLSGDILSLVNCFSLTVLNVSYNNLAGDIPVGNNFSRFLPGSFIGNPGLCGYWLNSPCHTSHPSDRAAISKAAILGIALGALVILLMILVAVCRPHNPTPYPEGSPNKPVSYISPKLVILHMNMALHVHEDIMRMTENLSEKYIIGSGSSSTVYKCVLKNCRPVAIKRLYSHYPQSLKEFETELETVGSIKHRNLVSLQGYCLSPSGNLLFYDYMENGSLWDLLHGLTKKKKLDWDTRLRIALGAAEGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLSASKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNDSNLHQLIMSKTANNAVMETVDPDISATCKDLGVVKKLFQLALLCTKRQPSDRPTMHEVTRVLESLLLSTAPKQPTPLPPPPQLLAKVPSYMEEYANLKNPNAINCTSLSTSDAQLFLKFGEVISQNSG* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01218 988 Gene3D Ribonuclease Inhibitor 452 576 IPR032675 -
Eupl10g01218 988 Gene3D Transferase(Phosphotransferase) domain 1 732 933 - -
Eupl10g01218 988 CDD STKc_IRAK 662 925 - -
Eupl10g01218 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Eupl10g01218 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 732 933 - -
Eupl10g01218 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 195 - -
Eupl10g01218 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 627 731 - -
Eupl10g01218 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 196 305 - -
Eupl10g01218 988 SUPERFAMILY L domain-like 30 267 - -
Eupl10g01218 988 ProSiteProfiles Leucine-rich repeat profile. 436 458 IPR001611 GO:0005515
Eupl10g01218 988 SUPERFAMILY RNI-like 212 547 - -
Eupl10g01218 988 SMART serkin_6 656 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01218 988 ProSiteProfiles Protein kinase domain profile. 656 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01218 988 Gene3D Ribonuclease Inhibitor 269 354 IPR032675 -
Eupl10g01218 988 Gene3D Ribonuclease Inhibitor 355 451 IPR032675 -
Eupl10g01218 988 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Eupl10g01218 988 SMART LRR_typ_2 410 434 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 99 123 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 458 481 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 338 362 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 482 506 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 219 243 IPR003591 -
Eupl10g01218 988 SMART LRR_typ_2 171 195 IPR003591 -
Eupl10g01218 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 306 578 - -
Eupl10g01218 988 SUPERFAMILY Protein kinase-like (PK-like) 638 922 IPR011009 -
Eupl10g01218 988 Gene3D Ribonuclease Inhibitor 194 268 IPR032675 -
Eupl10g01218 988 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Eupl10g01218 988 Pfam Protein kinase domain 659 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01218 988 Pfam Leucine rich repeat 368 423 IPR001611 GO:0005515
Eupl10g01218 988 Pfam Leucine rich repeat 436 495 IPR001611 GO:0005515
Eupl10g01218 988 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Eupl10g01218 988 ProSiteProfiles Leucine-rich repeat profile. 173 195 IPR001611 GO:0005515
Eupl10g01218 988 Gene3D Phosphorylase Kinase; domain 1 629 731 - -
Eupl10g01218 988 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 170 924 - -
Eupl10g01218 988 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01218 Eupl-Chr10 32238186 32247299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01218 101 926 Receptor kinase-like Gene Family AT5G07180 68.198 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Eupl10g01218 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01218 K20718 - nnu:104600563 1643.25