Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01211 ATGAATGCCAGAAACAGAAATCCTTTCACTGCAGCTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATATTCAAATACATGGTGTCAGGAGTACCCATTCCACCTGACCTCATCTTCCCTCTCAAGAGAAGCATGGACTCTTCAATCTGTTCAAGGCTCTTCCCTCACCAAACAATTGGGTGGGGTTGTTTTCAGATGGGTTTTGGCAGGAAAGCAGACCCAGAACCAGGGAGGTGCAGAAGAACAGATGGGAAGAAGTGGAGATGCTCAAAAGAAGCATTCCCAGATTCAAAATACTGTGAGAAACATATGCACAGAGGCAGAAACCGTTCAAGAAAGCCCGTGGAAGTTATTACAACAAATCCCTCGACATCCATTCCATCATTCACCACCAAAAATCACCCCACCACCGCCTCTTCTTATTCTCTCTCTCCATCAATGACTGCTGACACCCATCACCACCACCACCATCCTTACTACGACACCCCTCTTCATCCTTTCCTTCATCCTCATTCCTCCTCTTCTAGACCTCCCGATCTCGATTTCTCACCGCAAAACAACAATACCCATTTGGTTTTAGACTCTGGATCTTACTCTCAAGCTGATAAAGATTACAGAAGAAACAGGTACGTTAATGGATTGAAGGAGGCGGTGGATGAGCGAGCTTTCTTCTCAGAAGCTTCAGGGACTCTTAGGGGTATACCCAATTCGTCTCTCGATGATCCATGTCGGTTAACACCGCTGAGGATGAGTTCCTCCTCTGTTGCTCAACCAAAGCAGAGAAACTGCTCTGTATTACAAAATGGGCACTCTCAATTGCAGTTGCAAAACCTTACTGATCTCTCTAAACAGCAAGAGAAACATTGCTTTGTTTTGGGCACCGATTTCAAATCCGAAAGGCCTATGAAGATGGAGAGAGAAGACGAACCCCAGCAGCCATTGCGCCACTTCTTCGATGAGTGGCCACCGAAGAGCAGAAACTCCTGGCTCGATTTGGAGGAGGACCGTTCAAACCGAGCCTCATTCTCAACAACCCAGCTCTCAATTTCCATTCCCACATCTTCTCGAGACTTCCCGGTTTCCAATTCTCCCCCCAGATGA 1101 0.4705 MNARNRNPFTAAQWQELEHQALIFKYMVSGVPIPPDLIFPLKRSMDSSICSRLFPHQTIGWGCFQMGFGRKADPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVEVITTNPSTSIPSFTTKNHPTTASSYSLSPSMTADTHHHHHHPYYDTPLHPFLHPHSSSSRPPDLDFSPQNNNTHLVLDSGSYSQADKDYRRNRYVNGLKEAVDERAFFSEASGTLRGIPNSSLDDPCRLTPLRMSSSSVAQPKQRNCSVLQNGHSQLQLQNLTDLSKQQEKHCFVLGTDFKSERPMKMEREDEPQQPLRHFFDEWPPKSRNSWLDLEEDRSNRASFSTTQLSISIPTSSRDFPVSNSPPR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01211 366 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl10g01211 366 Pfam WRC 74 116 IPR014977 -
Eupl10g01211 366 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
Eupl10g01211 366 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl10g01211 366 MobiDBLite consensus disorder prediction 300 323 - -
Eupl10g01211 366 MobiDBLite consensus disorder prediction 335 366 - -
Eupl10g01211 366 MobiDBLite consensus disorder prediction 119 148 - -
Eupl10g01211 366 MobiDBLite consensus disorder prediction 339 360 - -
Eupl10g01211 366 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl10g01211 366 MobiDBLite consensus disorder prediction 176 193 - -
Eupl10g01211 366 PANTHER GROWTH-REGULATING FACTOR 5 7 357 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl10g01211 366 MobiDBLite consensus disorder prediction 119 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01211 Eupl-Chr10 32175018 32176975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01211 6 296 GRF Transcription Factor Family AT3G13960 40.303 1.43e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl10g01211 WRC 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01211 - - nnu:104609332 529.635