Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01209 ATGGAAAATCTGATGTTCATCACTATGATGGTCTCTTCCTTTCTGCTTCTCTGGTGTGCCATCAAAGTATTTTACTCCATTTGGTGGAAACCCAAAAGCTTAGAGAAGCTTTTGAAGCAACAAGGGATCAAAGGTACTCCTTACAAGCTTTCGCATGGAGACCTCAAAGAGTATGCGAGTTTGATGAAGGAACCATGTTCCAAACCCATGAATCTAACGCACAGTATCACCCCACGTGTCATTCCATTCACCCAGAAAACGGTGCAAACCCATGGGAATATATCTGTGTTTTGGTTTGAGACAACTCCAAGGCTGATCATCTTGGATCCAGAACTGATGAAGGAAATTCTGTCTAACAAGATGGGTCACTTTCAAAAGCCACCAGTAAACCCTCTTATTGATATTCTAACAATGGGGCTTTCAACCTTGGAAAGAGAGAAATGGGCCAAACGCAGAAGGCTTCTCAAACCTGCTTTCCACCAAGAAAAACTGAAGGGAATGATGCCAGCATTTTCAACTAGTAGTAACAAGTTTATCGAAAGATGGAAGAAGTTGGTTGGTCCTCAAGGATCTTGTGAATTGGATGTCTGGCCTGAACTCCAGAATTTTACTGGAGACGTCATCTCACGGGCAGCCTTCGGAAGCAGCGTTGAAGAAGGCAAGAGGATCTTTGAACTTCAAAAAGAGCAGACTATACTAGTTATCGAAGCTTCTCAATCTAATGATCTCCAAGCAAGTGTGAGGAACTCAAACAATGATGGGATGACAATTGAAGATGTGATAGAGGAATGCAAGTTGTTCTACTTTGCTGGCCAAGAAACGACCTCCACCTGGCTAACATGGACAATGATTCTCTTAGCTTTGCACCCAAGCTGGCAAGAGAAGGCAAGGGAAGAGGTTCTGCAAATCTGTGGAAAAAACATGCCCAATTTTGAAAGTATAAGCCATTTCAGGATTGTAACCATGATACTATATGAAGTCCTAAGTGAGAATATGAGTAATTGGTTGGGGTTCTCTCTGACTCCACACCTGAGCATCGATGAAGGCTTTGGAGGAGAAGACGAAGGAGGTTTCTCCTCTCATATGTCGGTCATGCCCTTGCGTTCTGATGGTTCTCTTTGTGTTATGGACGATTTCAGGCGGTCTGATCATGGTGGAGATTGGAGATATGAGAAAGAAGGACCAAAGCTTGAAAATTTCTTGGGTGGGTACTCCAACTCTACCCAAGAAAACAACGTTTATTATCAAAGTGAAGATCACGCGTTCCACCATAGAAATCAAAATCCCAACAGTGGTTCTAGAATCAACGTAAACATACCTCCAACCTTCAACACTAATGGAGAGATGGAAAGAGAAGAGAGTCTCACAAATCCATCTCCATTGATCCAAGCTTTCCATTATCCTCAACACCATTACAACGGAAACCCACAAACCATTATCCCCACTGTGCACCTTCAAAACTCCAATCAAAATCCCAACTCTCATAACAACATGTATCACCATGTTCCTCTTGAAAGTGCAACTTCAATTTCTGGGTTCAAGTCATGGTTGCGTCAAACCCCATTTTCAAGCGAGAAATCTTCTGTCGAAGCAAGCAACTGTAACTTTCAGCCTCTCTCACTCTCTATGAACCCTGGCTCGCAGACAGGAGTATCTAGTGTTTCTCCGTCTACGCCGACGGAGAATCGAAAACGACCAGGTGGGAAGTCTGTCAGTAGAGAACCAGTTCCTCGTAAATCAATCGATACATTTGGACAAAGAACTTCTCAATATCGTGGTGTTACGAGGCATCGATGGACTGGAAGATACGAGGCCCATTTGTGGGACAACAGTTGCAGAAGGGAAGGACAATCGAGGAAAGGAAGGCAGGGTGGGTATGATAAAGAAGAAAAGGCTGCGAGGGCTTATGATTTAGCTGCACTGAAGTACTGGGGTCCTACAACCCATATAAATTTCCCTCTGAGCACTTACGAGAAAGAGCTTGAAGAGATGAAGAACATGACCAGGCAGGAATTTGTAGCCAACTTAAGAAGGAAAAGCAGTGGATTCTCAAGAGGGGCGTCCGTATACAGAGGAGTGACGAGACACCATCAACATGGAAGGTGGCAAGCTCGAATAGGGAGGGTTGCAGGCAACAAGGACTTGTACCTTGGAACATTCAGCACTCAGGAGGAAGCTGCTGAAGCCTATGACATTGCTGCAATCAAATTTCGAGGGATAAGCGCGGTCACCAACTTTGAAATTAGCAAGTATGATGTAAAGCGTATTTGTGCCAGCACTACCCTCATTGGCAGTGATCTTGCAAAGCGCCCCCAACTTGATTCTGACGAATGTATCTCTGCCCCGTCTCAGCCCCTTGCCATAACAAATGGTGGTTCTGGTGATGAATTTGTGTACACCACCACCACAGACGATCTACAACGACAACAGAACCTGAACAATGATGCGGTCTCTTTAGTACATTCAGGAAGCCCAAAACCATCTAATGCTTCACAGAGCGAGTACAAAGACTACCCTCAAACGTTCTTCTCTCTGCATGCTCTGAAGTATGAGAGCAGTGACATTGGTGATGATCATAGCAGCGCGAGCAATGGTGGGGTTGGGAATGTGAATTGGATGGATGGTCGGCAGACAAATGTGGTTCATCAATTTCCAATGTTTGCTCTTTGGAATGAATGA 2679 0.4446 MENLMFITMMVSSFLLLWCAIKVFYSIWWKPKSLEKLLKQQGIKGTPYKLSHGDLKEYASLMKEPCSKPMNLTHSITPRVIPFTQKTVQTHGNISVFWFETTPRLIILDPELMKEILSNKMGHFQKPPVNPLIDILTMGLSTLEREKWAKRRRLLKPAFHQEKLKGMMPAFSTSSNKFIERWKKLVGPQGSCELDVWPELQNFTGDVISRAAFGSSVEEGKRIFELQKEQTILVIEASQSNDLQASVRNSNNDGMTIEDVIEECKLFYFAGQETTSTWLTWTMILLALHPSWQEKAREEVLQICGKNMPNFESISHFRIVTMILYEVLSENMSNWLGFSLTPHLSIDEGFGGEDEGGFSSHMSVMPLRSDGSLCVMDDFRRSDHGGDWRYEKEGPKLENFLGGYSNSTQENNVYYQSEDHAFHHRNQNPNSGSRINVNIPPTFNTNGEMEREESLTNPSPLIQAFHYPQHHYNGNPQTIIPTVHLQNSNQNPNSHNNMYHHVPLESATSISGFKSWLRQTPFSSEKSSVEASNCNFQPLSLSMNPGSQTGVSSVSPSTPTENRKRPGGKSVSREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKNMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGISAVTNFEISKYDVKRICASTTLIGSDLAKRPQLDSDECISAPSQPLAITNGGSGDEFVYTTTTDDLQRQQNLNNDAVSLVHSGSPKPSNASQSEYKDYPQTFFSLHALKYESSDIGDDHSSASNGGVGNVNWMDGRQTNVVHQFPMFALWNE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01209 892 Pfam Cytochrome P450 243 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 Pfam Cytochrome P450 84 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 ProSiteProfiles AP2/ERF domain profile. 590 653 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 FunFam AP2-like ethylene-responsive transcription factor 688 749 - -
Eupl10g01209 892 SMART rav1_2 689 753 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 SMART rav1_2 590 659 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 Gene3D AP2/ERF domain 589 655 IPR036955 GO:0003700|GO:0006355
Eupl10g01209 892 Gene3D AP2/ERF domain 689 749 IPR036955 GO:0003700|GO:0006355
Eupl10g01209 892 PRINTS Group II E-class P450 signature 145 165 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 PRINTS Group II E-class P450 signature 202 220 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 490 778 - -
Eupl10g01209 892 Gene3D Cytochrome P450 32 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 Gene3D Cytochrome P450 231 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 MobiDBLite consensus disorder prediction 539 565 - -
Eupl10g01209 892 CDD AP2 688 749 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 SUPERFAMILY DNA-binding domain 688 749 IPR016177 GO:0003677
Eupl10g01209 892 SUPERFAMILY Cytochrome P450 75 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl10g01209 892 SUPERFAMILY DNA-binding domain 589 655 IPR016177 GO:0003677
Eupl10g01209 892 CDD AP2 589 655 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 PRINTS Ethylene responsive element binding protein signature 591 602 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 PRINTS Ethylene responsive element binding protein signature 729 749 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 FunFam AP2-like ethylene-responsive transcription factor ANT 589 655 - -
Eupl10g01209 892 ProSiteProfiles AP2/ERF domain profile. 689 747 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 MobiDBLite consensus disorder prediction 539 586 - -
Eupl10g01209 892 Pfam AP2 domain 590 645 IPR001471 GO:0003700|GO:0006355
Eupl10g01209 892 Pfam AP2 domain 688 739 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01209 Eupl-Chr10 32144729 32158786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01209 332 769 AP2-EREBP Transcription Factor Family AT1G72570 51.282 5.98e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl10g01209 p450 4.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01209 K09285 - nnu:104609334 784.252