Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01203 ATGGGGAGGAGTCCATGTTGTTTTAAAGAAGGAGTAAACAGAGGAGCCTGGACGACCTTGGAAGATAAAATCCTCATGGCTTACGTTAAAGCCCATGGAGAAGGGAAATGGGGGATTCTCCCCAAGAAAGCAGGCTTGAAACGATGTGGGAAGAGCTGCAGGCTTCGATGGCTGAATTATCTGAGACCTGACATCAAGAGGGGCAACATTTCCCATGATGAAGAGGAGCTCATCATCAGACTCCACAAGCTTCTTGGCAACAGATGGTCTCTAATAGCAGGAAGACTGCCAGGCCGAACAGACAATGAAATCAAGAACTACTGGAACACAACTTTGAGGAAGAAGGTTCAAGTTCAACCCTCTTCATCACCATCCAAACAAAAAACAATAAGCAAATCCAAGGAGAAAAAGCCTCAACCCCAACAAGTAATCCGAACCAAGGCCTTAAGGTGCACCAAGGTCCTTGTCCCTCCACCAAATCAAGTACTAGTCCCATCTCTAAACAATAATCAAGCCATGCACTCAACGACCGAGAATTCAGTAGATCTTCAAGCCCATCAGAACCAGGCAGTAATGCATCAAGATTCGGATAATAAGATGATGGATTTTGGGATTAGAGAGCTCTGTTTGCTGTCCTCTCCGGACACCAATTTCATGTGTCTAGCCGGTGATGATTTTCAAGTTAGCGATGGTGCGACAGGGGACGACTATCGCTCCCTACTGTTTGATGAACCCATTTCCAAAAATTGGATGGAAAATGATTGTCTTGAACTAAATGCAGCATTGGATTTTGGATCTTTGGCTTCTTTTCTTGATCCAGAAGAATGGTCTTGA 834 0.4472 MGRSPCCFKEGVNRGAWTTLEDKILMAYVKAHGEGKWGILPKKAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLRKKVQVQPSSSPSKQKTISKSKEKKPQPQQVIRTKALRCTKVLVPPPNQVLVPSLNNNQAMHSTTENSVDLQAHQNQAVMHQDSDNKMMDFGIRELCLLSSPDTNFMCLAGDDFQVSDGATGDDYRSLLFDEPISKNWMENDCLELNAALDFGSLASFLDPEEWS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01203 277 MobiDBLite consensus disorder prediction 115 142 - -
Eupl10g01203 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl10g01203 277 CDD SANT 16 61 IPR001005 -
Eupl10g01203 277 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl10g01203 277 FunFam MYB-related transcription factor 13 66 - -
Eupl10g01203 277 FunFam Transcription factor TT2 70 141 - -
Eupl10g01203 277 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl10g01203 277 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Eupl10g01203 277 Gene3D - 71 144 - -
Eupl10g01203 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Eupl10g01203 277 SMART sant 13 63 IPR001005 -
Eupl10g01203 277 SMART sant 66 114 IPR001005 -
Eupl10g01203 277 Gene3D - 14 66 - -
Eupl10g01203 277 CDD SANT 71 112 IPR001005 -
Eupl10g01203 277 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Eupl10g01203 277 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl10g01203 277 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01203 Eupl-Chr10 32099121 32100475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01203 1 157 MYB Transcription Factor Family AT4G38620 58.750 5.21e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g01203 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01203 K09422 - qsu:112011853 293.893