Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01202 ATGGGTAGAAGCCCTTGTTGCGCCAAGGAGGGCTTGAACAGAGGTGCTTGGACTGCTGTTGAGGATCGAATTCTCACTGAATATATTAGAATCCATGGTGAAGGAAGATGGAGAAATCTTCCCAAAAAAGCAGGTCTTAAGAGATGTGGGAAGAGTTGTAGGCTTCGTTGGTTGAATTATCTAAGACCTGATATTAAGAGGGGGAACATATCTCACGATGAAGAGGAACTCATTATCAGGCTTCATAAACTCTTGGGGAACAGATGGTCTTTGATAGCCGGGAGGCTTCCAGGGCGAACAGACAATGAAATCAAGAATTATTGGAATACTTATTTAGGAAAGAAGGTTCAAGGTCACTCGATGTCTACTTCTACTCATAAACAGTACTCAAACCAGTACTCTAAAGAGAAGAAGAAACCAGCCGTGACCCATCCATCCATTGAACCATTCCCACCATCTCCGAAGATCGAATCCCGTGTGGTTCGAACCAAGGCATTAAGGTGCACCAAGGTTGTCTTCACTCCACAACCACAAAAAGTTGAATCTAATAACGTGACTGTTGGACCCTCCATGGTCGGAGATCACAAAGTAGTGGAATTAGAATCCTATGATGATCAGTACCTGTCTACTTTCACTCCCGGGGAAGACAATTCTTCTGATTTCATGATGGATCTCAATGTGGGGGAGCTTTGTCTATCTGATCTTCTACAATCCGACTTCTCTCAGCTCTGCGATTTCGATAATGCGCTTGCGAGAGATGGTAACAACGACGTATCGCCATCGTCTGGTCATCATCCTTTCGTGTTCCATGATGAAATGCGGGAGGAGGACTGGATGGAAAACGGTTGTTTTCAACATGATGTCTCTTCGAATCTCCGGTCGTTGGCGTCGTTTCTCGAATCCGAAGATGACTGGCTAGCAGAATAA 927 0.4477 MGRSPCCAKEGLNRGAWTAVEDRILTEYIRIHGEGRWRNLPKKAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLGKKVQGHSMSTSTHKQYSNQYSKEKKKPAVTHPSIEPFPPSPKIESRVVRTKALRCTKVVFTPQPQKVESNNVTVGPSMVGDHKVVELESYDDQYLSTFTPGEDNSSDFMMDLNVGELCLSDLLQSDFSQLCDFDNALARDGNNDVSPSSGHHPFVFHDEMREEDWMENGCFQHDVSSNLRSLASFLESEDDWLAE* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01202 308 SMART sant 66 114 IPR001005 -
Eupl10g01202 308 SMART sant 13 63 IPR001005 -
Eupl10g01202 308 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl10g01202 308 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Eupl10g01202 308 CDD SANT 16 61 IPR001005 -
Eupl10g01202 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl10g01202 308 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Eupl10g01202 308 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl10g01202 308 Gene3D - 14 66 - -
Eupl10g01202 308 Gene3D - 71 143 - -
Eupl10g01202 308 FunFam Transcription factor TT2 70 140 - -
Eupl10g01202 308 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 157 - -
Eupl10g01202 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Eupl10g01202 308 CDD SANT 71 112 IPR001005 -
Eupl10g01202 308 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl10g01202 308 MobiDBLite consensus disorder prediction 119 155 - -
Eupl10g01202 308 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01202 Eupl-Chr10 32095746 32097113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01202 1 128 MYB Transcription Factor Family AT4G09460 68.750 1.62e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g01202 Myb_DNA-binding 5.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01202 K09422 - nnu:104609338 376.711