Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01201 ATGGGTAGGAGCCCATGTTGTGCGAAGGAAGGACTCAACAGAGGAGCATGGTCTGCTCGCGAGGATCAAATCCTTATTACCTACATTAACAACTATGGAGAAGGAAAATGGAGAGACCTCCCTCAAAAAGCAGGTTTGCGACGATGCGGTAAGAGTTGCAGGCTCCGATGGTTGAATTATCTGAGGCCGGATATCAAGAGGGGCAATATTACCAAGGATGAAGATGAGCTCATTATCAGACTCCATAAGCTCCTTGGTAACAGATGGTCCCTCATAGCGGGGAGGCTACCAGGGAGAACAGATAATGAAATCAAGAATTATTGGAACACGAATTTGATCAAGAAGGTCCAAGGTCCGACAACACAAAAATCCATCAAACAATTTAATAAATCTGAAGAAAAGAAGCTGCTTATTGATGGATCCATGGTGATGGAACCCCAAGTGATGGTTGAAACTCCTCGTGTGATTCGAACTAAAGCCGTACGATGCACTAAGGTTGTCGTCATCCCACCAGAAGAAGGAAATCAGATGATGATCAAGAAAAATGTGGAGCCTACTTGGGATGGTGGGAGCTCGTCTTCAAACCAACAAGAAGACGATTCTTTCAACCTTTTGACGAATTTCGACATTGGAGAACTTCTCATATCGAACGTTCTTTCTTGTGACGTGATTCAAGAAACTGATGATCATGTGGTTGGTGGAGATGATGGTGGCAATAACACCTCATCGTCTTCTGATTATCCCATCTCAGCCCATATGACAATGCTTGAAGATTCAACAAGTAAAGAAATGGTTGAGAACTGGAGTACGTGTGACCCTCCCCATGTAGCTTCGGAGCTCAAGACACTGGTTTCTTTTCTAGATTTAGAAGATGAATGGATGGAAGCATAG 891 0.4377 MGRSPCCAKEGLNRGAWSAREDQILITYINNYGEGKWRDLPQKAGLRRCGKSCRLRWLNYLRPDIKRGNITKDEDELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLIKKVQGPTTQKSIKQFNKSEEKKLLIDGSMVMEPQVMVETPRVIRTKAVRCTKVVVIPPEEGNQMMIKKNVEPTWDGGSSSSNQQEDDSFNLLTNFDIGELLISNVLSCDVIQETDDHVVGGDDGGNNTSSSSDYPISAHMTMLEDSTSKEMVENWSTCDPPHVASELKTLVSFLDLEDEWMEA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01201 296 Gene3D - 7 67 - -
Eupl10g01201 296 CDD SANT 16 61 IPR001005 -
Eupl10g01201 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl10g01201 296 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 181 - -
Eupl10g01201 296 FunFam MYB-related transcription factor 13 66 - -
Eupl10g01201 296 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Eupl10g01201 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Eupl10g01201 296 CDD SANT 71 112 IPR001005 -
Eupl10g01201 296 SMART sant 13 63 IPR001005 -
Eupl10g01201 296 SMART sant 66 114 IPR001005 -
Eupl10g01201 296 Gene3D - 70 138 - -
Eupl10g01201 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl10g01201 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl10g01201 296 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Eupl10g01201 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01201 Eupl-Chr10 32078967 32080675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01201 1 187 MYB Transcription Factor Family AT2G16720 50.500 4.10e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g01201 Myb_DNA-binding 2.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01201 K09422 - ming:122075826 320.472