Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01190 ATGGACGCTTACGGAAAAGCTATAGCGAAAGGAGAAGTAGTTTTGGTTATTTCAGGTGAAGAAGAAGCTTCCAAGGAAAACAGAGATTCGAGTTCAATCTCTGCTTCGAAGAATTTGGAAGGTTTCGCTCCGCAGAGAGATTCGAATCTCTCGAATGTTGGATTCTCAGAGTTGGATAGTCTCAAATCCAGAGTAAAGATGTCCACTTTCATGAGCTTCTCTTCTCCAGAGATTTTGAAGTTCAGTCAGAGTTCGATTAAGCCTCCCAACCGAACTCGGCGTCTCGGAAGGTACATCGACGAGGAGGACCTCCTTAGATTCTTGAGTGAGGAGGAGGTGGATAATGTGTTCCCACTATTTGAAGGAGCTGTGGGGACTGGAAAGATTAAGAAGTCGGCTTTGAGGAACTGGGTGGCTGGTGTTTGGTGA 429 0.4569 MDAYGKAIAKGEVVLVISGEEEASKENRDSSSISASKNLEGFAPQRDSNLSNVGFSELDSLKSRVKMSTFMSFSSPEILKFSQSSIKPPNRTRRLGRYIDEEDLLRFLSEEEVDNVFPLFEGAVGTGKIKKSALRNWVAGVW* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01190 142 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 95 139 IPR016688 -
Eupl10g01190 142 MobiDBLite consensus disorder prediction 19 53 - -
Eupl10g01190 142 MobiDBLite consensus disorder prediction 29 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01190 Eupl-Chr10 31957534 31959417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01190 98 142 Mechanosensitive Ion Channel Family AT5G12080 60.000 7.50e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01190 K22048 - psom:113294354 78.1814