Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01170 ATGATCAATGAAGGGAAGAGCAACTCTATTCTGGTTAGTGGAGAAAGTGGTGCTGGTAAAACGGAAACAACAAAGATGCTCATGAGATATCTTGCATACTTGGGTGGGCGATCTGGTATAGAAGGAAGGACTGTTGAACAACAAGTTTTGGAATCCAATCCAGTTCTCGAAGCATTTGGGAACGCCAAAACTGTAAGAAACAACAACTCAAGTCGTTTTGGTAAATTTGTTGAAATCCAATTTGACAAGAATGGGAGGATATCTGGGGCAGCTATTAGAACTTACCTACTTGAAAGGTCTCGTGTTTGCCAAATTTCCGATCCTGAGAGAAACTACCATTGCTTTTACCTTCTTTGTTCTGCACCACCTGAGGATGTTGAGAAATATAAGTTGGGGAACCCTAAATCGTTCCATTACCTAAACCAATCTAATTGCTATGAGCTGGATGGAGTAAATGATTCCCGTGAATATCTTGCAACCAGAAGGGCTATGGATATAGTTGGAATCAGTGAGCATGAACAGGAGGCAATTTTCAGGGTGGTGGCGGCAATTCTTCATCTTGGTAATATTGATTTTGCGAAGGGAAAGGAAATAGACTCCTCTGTCATTAAGGATGAAAAGTCTCGGTTCCATCTTAAAATGACAGCTGAACTTCTTAGGTGTGATGCCCAGAGCTTGGAAGATGCACTGATTAAACGTGTAATGGTGACACCAGAAGAAGTTATCACAAGAACTCTTGATCCTGGTTCAGCAGTTGTTAGCAGGGATGGTTTAGCTAAAACAGTATACTCCCGCCTATTCGATTGGCTGGTGGATAAAATTAACATTTCGATTGGGCAGGATCCAAACTCAAAATCAATAATTGGGGTTCTTGACATTTACGGTTTTGAAAGCTTTAAGTGCAATAGTTTTGAGCAGTTCTGTATCAATTTTACAAATGAGAAGCTGCAACAACATTTTAACCAGCATGTCTTTAAAATGGAGCAGGAAGAATATACGAAAGAGGAAATCAATTGGAGCTACATAGAGTTTGTTGACAACCAAGATGTGTTGGATCTGATTGAGAAGAAACCTGGAGGAATTATTGCGCTTCTCGATGAAGCATGCATGTTTCCCAAGTCCACACATGAAACATTTGCCCAGAAGTTGTATCAGACTTTTAAAAATAACAAGCACTTTATGAAACCAAAGCTTTCTCGAACTGATTTTACTATATCTCACTATGCAGGGGAGGTGACATATCAAGCTAATCAGTTTCTAGACAAAAACAAAGATTATGTGGTGGCAGAACATCAAGAGTTATTGATTGCGTCAAAATGCCCCTTTGTGGCGGGTTTATTTCCTCCACTTCCAGAGGAATCATTGAAGTCATCCAAATTTTCTTCCATCGGATCACGCTTTAAGCTACAACTTCAATCTTTGATGGAGACCTTGAATTCAATGGAGCCTCATTACATTAGATGTGTGAAGCCAAACAATGTCCTCAAACCTGCTATTTTTGAGAACTTCAACATCATCCAACAGTTACGGTGTGGTGGTGTTCTTGAGGCAATTAGGATCAGTTGTGCTGGATATCCTACTAGACGAACATTTTATGAATTTCTTCATCGTTTTGGTGTCCTTGCTCCAGAAGTTTTGGAAGGAAACCATGATGAAAAGGTTGCGTGCCAAATGATCCTGAATAAAAAGGGATTGAAAGGTTATCAGATAGGCAAAACAAAGGTCTTCCTGAGAGCTGGTCAGATGGCTGAGTTGGATGCACGAAGAGCAGAGGTACTGGGCAATGCAGCTAGGGCTATTCAAAGGCAAATTCGTACATATATTGCTCGTAAGGAGTTCATCTCATTACGCAAGGCTGCCATTCATTTGCAATCTCATTGGAGAGGTAAAATTGCCTTCAAGCTGTATGAGCAGTTGAGACGGGAAGCATCAGCTGTGAAGATACAGAAGAATTTGCGTCGATATATTGACAGGAAATCCTACTTGATACTGTGGTCATCTGCAATCACATTGCAGACAGGCTTAAGGGCAATGATCACACGCAATGAATTCAGATTTAGAAAGCAGACTAAAGCCTCGATCATTATCCAGGCTCATTGGCGTTGCCACAGAGATTATTCGTACTATAAGAGTCTCCAGAAAGCAGCAATCATTTCTCAGTGTGGTTGGAGACGAAGGGTTGCTAGGAGAGAGCTCAGACAGCTCAGAATGGCTGCAAGAGAAACGGGAGCCCTTAAAGAAGCAAAAGACAAACTAGAAAAGCATGTGGAGGAACTTACATGGCGTTTGCAGTTTGAGAAACGGTTAAGGACAGATTTGGAGGAGACAAAAACCCAAGAAATTTCTAAGTTACAGGATGCTTTACATGCTATGCAAATACAAGTGGAAGAGGCAAACATCAGAGTTATCAAGGAACGAGAGGCAGCTCGGAGAGCTATTGAAGAAGCACCTCCAGTCATTAAAGAGACCCCTGTTTTAATTCAAGATACAGAGAAGGTCGATTCATTAATTGCTGAGGTTGAGAGCTTGAAGGCTTTGCTGCTATCAGAGAGAAAGGCAGCAGAAGAGACCACACAAGCCTACACCAATGCTCAGGCCAAAAATGGGGAAATGATCAAAAAGCTTGAAGATGCAGAGCGAAGAGTAGATCAGCTTCAAGATTCGGTGCAGAGGCTCGAAGAGAAACTTTCCAATATAGAATCAGAGAATCAAGTACTTCGTCAGCAAGCACTGGCCATTTCACCAACTAGTAAAGCCTTAGCTGCAAGGCAAAAGTCAACTATCATTCAGAGGACTCCAGAGAATCGAAAAATTCAAAATGGAGAAACAAAGATGACATCAGATTTGAGTCCAGCTGTATCTAATCCACGGGAGCCCGATACTGAGGAAAAGCCTCAGAAATCACTTAATGAGAAGCAGCAGGAGAACCAGGATTTGCTGATAAAGTGTATTTCACAAGACCTGGGATTCTCTGGGGGAAGACCTATTGCTGCTTGTCTCATTTACAAGTGCCTTCTTCACTGGAGGTCATGTGAAGTTGAAAGTACCAGTGTTTTTGATCGTATCATTCAGACAATAAGCTCAGCTATAGAGGTTCAGGATAATAATGACTTATTATCCTATTGGTTATCTAATTCATCCACATTATTGTTGCTCCTTCAACGCACACTGAAAGCAAGTGGGGCTGCTGGCTTGACTCCACAAAGGCGGAGATCAACATCGGCGTCACTGTTTGGCAGGATGTCTCGAGGACTTCGAGCATCTCCACAAAGTGCTGGGCTCCCATTTCTTAATGGTCGGATGCTTGGTGGACTGGATGACTTACGACAAGTCGAAGCCAGATATCCAGCTTTACTTTTTAAACAGCAACTCACTGCCTTCCTGGAGAAGATCTACGGAATGATAAGAGACAATCTGAAGAAAGAGATCTCTTCGTTGCTTGGATTGTGTATCCAGGCACCTAGATCATCCCGTGCAAGTTTAGTGAAAGGATCGCGTTCACAAGCAAATACTGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGCATTGTGAAAAGCCTGCAGAGTTACTTGAAGACATTAAGAGCCAACTATATTCCCCCATTCTTAGTCCGCAAGGTGTTCACTCAGATATTCTCATTCATCAACGTTCAGCTATTCAACAGCCTTCTTTTGCGGCGTGAGTGTTGCTCATTCAGCAACGGAGAGTATGTAAAAGCGGGGTTGGCTGAGCTAGAACAGTGGTGCATCAATGCAACTGAAGAGTATGCAGGCTCAGCTTGGGATGAACTGAAGCATATCAGACAAGCAGTTGGATTCCTGGTCATACATCAAAAGCCCAAGAAGACGTTGAATGAAATAACAAAGGACCTTTGCCCAGTGCTCAGCATTCAGCAACTATACAGAATCAGTACAATGTACTGGGATGACAAATATGGCACTCACAGCGTGTCTTCAGAAGTTATTTCCAGTATGAGAGTTCTGATGACCGAGGACTCGAACAATGCCATCAGCAGTTCATTTTTATTAGACGATGACTCGAGCATACCATTCTCTGTGGATGACATCTCGAAGTCAATGCAACAGATAGACATAACTGATATTGATCCTCCACCTCTGATTCGTGAAAACTCGGGGTTTGTCTTCTTGTTACAACGTGCAGAGTGA 4170 0.4223 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGIEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCSAPPEDVEKYKLGNPKSFHYLNQSNCYELDGVNDSREYLATRRAMDIVGISEHEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLKMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPGSAVVSRDGLAKTVYSRLFDWLVDKINISIGQDPNSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKHFMKPKLSRTDFTISHYAGEVTYQANQFLDKNKDYVVAEHQELLIASKCPFVAGLFPPLPEESLKSSKFSSIGSRFKLQLQSLMETLNSMEPHYIRCVKPNNVLKPAIFENFNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPEVLEGNHDEKVACQMILNKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARAIQRQIRTYIARKEFISLRKAAIHLQSHWRGKIAFKLYEQLRREASAVKIQKNLRRYIDRKSYLILWSSAITLQTGLRAMITRNEFRFRKQTKASIIIQAHWRCHRDYSYYKSLQKAAIISQCGWRRRVARRELRQLRMAARETGALKEAKDKLEKHVEELTWRLQFEKRLRTDLEETKTQEISKLQDALHAMQIQVEEANIRVIKEREAARRAIEEAPPVIKETPVLIQDTEKVDSLIAEVESLKALLLSERKAAEETTQAYTNAQAKNGEMIKKLEDAERRVDQLQDSVQRLEEKLSNIESENQVLRQQALAISPTSKALAARQKSTIIQRTPENRKIQNGETKMTSDLSPAVSNPREPDTEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAACLIYKCLLHWRSCEVESTSVFDRIIQTISSAIEVQDNNDLLSYWLSNSSTLLLLLQRTLKASGAAGLTPQRRRSTSASLFGRMSRGLRASPQSAGLPFLNGRMLGGLDDLRQVEARYPALLFKQQLTAFLEKIYGMIRDNLKKEISSLLGLCIQAPRSSRASLVKGSRSQANTVAQQALIAHWQSIVKSLQSYLKTLRANYIPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCINATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAISSSFLLDDDSSIPFSVDDISKSMQQIDITDIDPPPLIRENSGFVFLLQRAE* 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01170 1389 Pfam DIL domain 1208 1311 IPR002710 -
Eupl10g01170 1389 FunFam Myosin 2 170 286 - -
Eupl10g01170 1389 ProSiteProfiles Myosin motor domain profile. 1 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 ProSiteProfiles IQ motif profile. 595 619 IPR000048 GO:0005515
Eupl10g01170 1389 ProSiteProfiles IQ motif profile. 641 670 IPR000048 GO:0005515
Eupl10g01170 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 741 IPR027417 -
Eupl10g01170 1389 PANTHER MYOSIN 1 1320 - -
Eupl10g01170 1389 MobiDBLite consensus disorder prediction 957 971 - -
Eupl10g01170 1389 Coils Coil 861 909 - -
Eupl10g01170 1389 FunFam unconventional myosin-Va 692 739 - -
Eupl10g01170 1389 MobiDBLite consensus disorder prediction 922 954 - -
Eupl10g01170 1389 FunFam Myosin heavy chain 110 165 - -
Eupl10g01170 1389 Gene3D - 691 740 - -
Eupl10g01170 1389 Gene3D - 643 690 - -
Eupl10g01170 1389 Gene3D - 593 642 - -
Eupl10g01170 1389 CDD MyosinXI_CBD 971 1355 IPR037975 GO:0007015
Eupl10g01170 1389 CDD MYSc_Myo11 1 578 IPR036018 -
Eupl10g01170 1389 FunFam unconventional myosin-Va 644 691 - -
Eupl10g01170 1389 Coils Coil 837 857 - -
Eupl10g01170 1389 PRINTS Myosin heavy chain signature 340 368 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 PRINTS Myosin heavy chain signature 287 315 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 PRINTS Myosin heavy chain signature 54 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 PRINTS Myosin heavy chain signature 7 32 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 ProSiteProfiles Dilute domain profile. 1020 1332 IPR002710 -
Eupl10g01170 1389 FunFam unconventional myosin-Va 595 643 - -
Eupl10g01170 1389 Pfam Myosin head (motor domain) 1 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 ProSiteProfiles IQ motif profile. 616 645 IPR000048 GO:0005515
Eupl10g01170 1389 FunFam Class V myosin 297 435 - -
Eupl10g01170 1389 Gene3D - 110 168 - -
Eupl10g01170 1389 Gene3D Kinesin motor domain 1 520 IPR036961 -
Eupl10g01170 1389 SMART DIL_2 1207 1314 IPR002710 -
Eupl10g01170 1389 SMART iq_5 688 710 IPR000048 GO:0005515
Eupl10g01170 1389 SMART iq_5 592 614 IPR000048 GO:0005515
Eupl10g01170 1389 SMART iq_5 615 637 IPR000048 GO:0005515
Eupl10g01170 1389 SMART iq_5 663 685 IPR000048 GO:0005515
Eupl10g01170 1389 SMART iq_5 711 733 IPR000048 GO:0005515
Eupl10g01170 1389 SMART iq_5 640 662 IPR000048 GO:0005515
Eupl10g01170 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 643 IPR027417 -
Eupl10g01170 1389 Coils Coil 738 769 - -
Eupl10g01170 1389 Gene3D - 525 591 - -
Eupl10g01170 1389 Pfam IQ calmodulin-binding motif 596 613 IPR000048 GO:0005515
Eupl10g01170 1389 Pfam IQ calmodulin-binding motif 617 636 IPR000048 GO:0005515
Eupl10g01170 1389 Pfam IQ calmodulin-binding motif 690 710 IPR000048 GO:0005515
Eupl10g01170 1389 Pfam IQ calmodulin-binding motif 643 661 IPR000048 GO:0005515
Eupl10g01170 1389 Gene3D - 297 481 - -
Eupl10g01170 1389 Gene3D Myosin VI head, motor domain, U50 subdomain 170 459 - -
Eupl10g01170 1389 SMART MYSc_2a 1 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl10g01170 1389 FunFam Myosin XI D 525 588 - -
Eupl10g01170 1389 ProSiteProfiles IQ motif profile. 712 741 IPR000048 GO:0005515
Eupl10g01170 1389 Coils Coil 781 815 - -
Eupl10g01170 1389 ProSiteProfiles IQ motif profile. 666 693 IPR000048 GO:0005515
Eupl10g01170 1389 MobiDBLite consensus disorder prediction 922 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01170 Eupl-Chr10 31634253 31650609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01170 1 1389 Myosins gene family AT5G20490 81.138 0.0 2326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01170 K10357 - nnu:104600631 2406.33