Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01161 ATGGAGGAGATGTCTTCAGCAGTCGCAGTGCCGTTTAGGTTAGGTAATTCAATCTGTGATAACTCGGCGATAGCAACCCACATGGAAATCACACGGCTCAAGCTCATAACAGACACTGCAAGCTTGTTGTCTGAACCAGCAACCAAGCTGCCTCCTGAGTCTGTGACTGGTGGAGATGAAGGCTGCAGTAGTTCACAGAATGAAGTTGATATAGTGACCATGCTAGCACCAGAAGAAGAAGATAAGGGAGGAGTGGCAGCAGCTTTGTGTCAGATTATACCTGAAAGTGAAAGCAGTTGGGTTGCTAGTGATGCTATAATTCAGGAAGTTGAGGAAGATGATAACTTATCTGTGGGGGGCGATCAAATACTCGATGACTCTTGTTCTCTTCCTGTGACTAGTGATACTAATAGTATCTGTGGTGAAGAATTCTTAGCTTTGGAGTCTGCAGAAATCAACAAGAGCATCGGAAATGTTCAAATCATTTCGAAAGGCACGGCTTTGGAGGAACCACCGAGTGTTCAGCAGGAGCCCGTGGGTAATTTCATTGCCCTGTCAATGGGCTCTGAGGTTGGGGAGAGGTTTGATACGAAAGCATCAGTGGTGGTTCTTCAGGTGCCTCAGGAGAAGAGGATCACTGGAATAGGCAACCGAGGTGTTTTTGATTTAGATTTTGTACCCCTTTGGGGATTTATATCTATCTGTGGGAGGAGACCCGAAATGGAAGATGATTTTGCAGCTGTACCTCGGTTTTTGAAAATTCCTCTTCACATGCTAATCGGGAATCCCATAGTGGACGGCATGAACCAAGGTTTGGGTCACTCGCCTGCCCATTTCTGTGGAGTCTATGATGGCCATGGGGGTTCTCAGGTTGCTAACTACTGTCGTGATCGTATCCATTTGGCTCTCACCGAGGAGATAGAAATTGTGAAAGAAGGTTTCGTCAATGGAAGCATCAGGGATAATTTGCAGATGCAATGGGAGAAGACCTTCACCAACTGCTTTCTGAAAGTTGATGCCGAGGTTGGAGGGAGAGTCAGCAGGGGTAGTGTTGAGGGTAGCCCTGAACCTGTCGCTCCAGAAACAGTCGGGTCTACTGCTGTGGTTGCTGTTATTTGTGCGTCCCACATTGTAGTTGCAAACTGTGGTGATTCAAGAGCAGTCTTGTGTCGGGGCAAACAACCCGTGCCATTGTCAGTGGATCATAAACCAAATAGAGAAGATGAATATGCAAGGATTGAAGCAGCTGGGGGCAAGGTCATACAGTGGAATGGACATCGTGTGTTTGGTGTCCTTGCAATGTCAAGGTCCATTGGTGACAGATATTTGAAACCATGGATTATTCCAGAACCAGAAATCATGTTTGTTCCCCGAATGAAAGAGGATGAATGCCTTATCCTAGCCAGCGATGGGTTATGGGATGTCATGACAAACGAGGAGGTTTGTGACGTGGCTCGAAGGCGGATCCTGCTCTGGCACAAAAAGAATGGTGTTACAACTTCTGTGGAAAGGGGTGAAGGAGTTGATCCTGCAGCTCAGGCAGCAGCGGAGTGCCTCTCAAAGCTTGCTCTCCAAAGGGGAAGCAAGGATAACATTACTGTGATTGTGGTGGACTTGAAAGCACAGAGGAAGTTCAAGAGCAAATCCTGA 1650 0.4709 MEEMSSAVAVPFRLGNSICDNSAIATHMEITRLKLITDTASLLSEPATKLPPESVTGGDEGCSSSQNEVDIVTMLAPEEEDKGGVAAALCQIIPESESSWVASDAIIQEVEEDDNLSVGGDQILDDSCSLPVTSDTNSICGEEFLALESAEINKSIGNVQIISKGTALEEPPSVQQEPVGNFIALSMGSEVGERFDTKASVVVLQVPQEKRITGIGNRGVFDLDFVPLWGFISICGRRPEMEDDFAAVPRFLKIPLHMLIGNPIVDGMNQGLGHSPAHFCGVYDGHGGSQVANYCRDRIHLALTEEIEIVKEGFVNGSIRDNLQMQWEKTFTNCFLKVDAEVGGRVSRGSVEGSPEPVAPETVGSTAVVAVICASHIVVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEIMFVPRMKEDECLILASDGLWDVMTNEEVCDVARRRILLWHKKNGVTTSVERGEGVDPAAQAAAECLSKLALQRGSKDNITVIVVDLKAQRKFKSKS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01161 549 FunFam Protein phosphatase 2C 16 216 549 - -
Eupl10g01161 549 SUPERFAMILY PP2C-like 225 540 IPR036457 -
Eupl10g01161 549 Gene3D - 215 549 IPR036457 -
Eupl10g01161 549 ProSiteProfiles PPM-type phosphatase domain profile. 228 539 IPR001932 -
Eupl10g01161 549 SMART PP2C_4 218 537 IPR001932 -
Eupl10g01161 549 Pfam Protein phosphatase 2C 266 532 IPR001932 -
Eupl10g01161 549 PANTHER PROTEIN PHOSPHATASE 177 539 IPR015655 GO:0004722|GO:0006470
Eupl10g01161 549 CDD PP2Cc 233 539 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01161 Eupl-Chr10 31573232 31577977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01161 1 549 PP2C-type Phosphatase Gene Family AT1G17550 48.750 6.28e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01161 K14497 - nnu:104590396 766.533