Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01159 ATGGAGGATCGTCGGGAGGAGGAGGAGAAGGGTGAGCCCTCACAGGAGGAGACTCTAGGCTCGAGTCTGACTATGGAGAAGGTGGCTGCAGCCAAGCAGTTTATCGAGAACCATTACAGAGCCCAGATGAAGAACATCCAAGAACGTAAAGAAAGGCGCTGGGTGTTAGAAAGGAAATTAGCTTCTTCGGATGTCTCGAAGGAAGAACAAATTAATCTAATCAAGGATTTGGAACGGAAAGAGACAGAGTTTATGCGACTTAAAAGACACAAGATTTGTGTTGATGACTTTGAGCTTTTGACCATTATTGGACGAGGAGCTTTTGGAGAGGTTAGGCTATGCCGAGAAAAGTCATCTGGCAATATTTTTGCCATGAAAAAGTTGAAGAAATCAGAAATGCTTAGCAGGGGCCAGGTTGAACATGTTAGAGCTGAAAGGAACTTGCTTGCAGAAGTTGGCAGCCACTGCATTGTGAAACTCTACTATTCATTTCAAGATGCCGAATACTTATATCTAATTATGGAATATCTGCCTGGTGGTGACATGATGACTTTGCTGATAAGAGAAGACACCTTAACTGAAAGTGTGGCTAGATTTTATGTCGCTCAAAGTGTCCTGGCCATAGAATCCATTCATAAACATAACTACATTCACAGAGATATTAAACCTGACAACCTTCTATTGGACAAAAATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGTACAACTCTATCTACTCTAAACGAAAATGAACCCTTGGATGATGAAAATCGGAGGGAATCAATGGATGTCGACGGGTGCTTCCCAGATACAGATAATGGGAGCAGGTGGAAAAGCCCCTGTGAACAACTTCAGCACTGGCAGATGAACAGGAGGAAGCTGGCATTTTCCACAGTGGGCACACCAGACTATATTGCTCCAGAAGTATTACTGAAGAAAGGTTATGCCATGGAGTGTGACTGGTGGTCACTAGGTGCAATAATGTACGAGATGCTTGTTGGTTATCCCCCATTTTATTCTGATGATCCAGTAACCACGTGCAGGAAGATCGTGCACTGGAGAAATCACTTAAAATTTCCGGAAGAGGCAAGGTTGACACTAGAGGCAAAGGATCTTATTTGTAGGTTGTTATGCGATGTTGACCATAGGCTAGGTACCGGAGGGGCAGACCAAATAAAAGCTCATCCTTGGTTCAAAGATGTTGAATGGGACAAACTTTATGAAATGGAGGCGGCATTTAAACCAGAGATCGATGGGGAGCTAGATACTCAAAACTTTCTGAAGTTTGATGAGTTGGATCCTCCAAGACCTGCAAGAACTGGCTCTGGACCCTCGCGGAAGATGCTATTAACTCCCAAAGATTTAAGCTTCGTTGGTTATACATACAAGAATTTTGATGCTGTCAAAGGGCTTCATCAAATGTTTGATACGAAGAGGAGTACATCACCGACGCAGCCATCTATCGATTCTGTCTTCAGTGATTCTGCAGTGAACCACTCCGTGAAGCCAACAACAGAGGAAACAGAAACACAGATGGTTGAATCAGGTGATCCCATGTCACCATGA 1584 0.4362 MEDRREEEEKGEPSQEETLGSSLTMEKVAAAKQFIENHYRAQMKNIQERKERRWVLERKLASSDVSKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKSSGNIFAMKKLKKSEMLSRGQVEHVRAERNLLAEVGSHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREDTLTESVARFYVAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLNENEPLDDENRRESMDVDGCFPDTDNGSRWKSPCEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYAMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWRNHLKFPEEARLTLEAKDLICRLLCDVDHRLGTGGADQIKAHPWFKDVEWDKLYEMEAAFKPEIDGELDTQNFLKFDELDPPRPARTGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGLHQMFDTKRSTSPTQPSIDSVFSDSAVNHSVKPTTEETETQMVESGDPMSP* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01159 527 MobiDBLite consensus disorder prediction 1 15 - -
Eupl10g01159 527 CDD STKc_NDR_like 95 469 - -
Eupl10g01159 527 ProSiteProfiles AGC-kinase C-terminal domain profile. 405 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl10g01159 527 ProSiteProfiles Protein kinase domain profile. 97 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01159 527 MobiDBLite consensus disorder prediction 1 23 - -
Eupl10g01159 527 Gene3D Transferase(Phosphotransferase) domain 1 298 422 - -
Eupl10g01159 527 CDD MobB_NDR_LATS-like 31 92 - -
Eupl10g01159 527 SMART pkinase_C_6 405 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl10g01159 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 451 - -
Eupl10g01159 527 FunFam Non-specific serine/threonine protein kinase 181 248 - -
Eupl10g01159 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Eupl10g01159 527 Pfam Protein kinase domain 296 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01159 527 Pfam Protein kinase domain 98 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01159 527 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Eupl10g01159 527 MobiDBLite consensus disorder prediction 483 527 - -
Eupl10g01159 527 Gene3D Phosphorylase Kinase; domain 1 423 432 - -
Eupl10g01159 527 Gene3D Phosphorylase Kinase; domain 1 56 180 - -
Eupl10g01159 527 SMART serkin_6 97 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01159 527 FunFam Non-specific serine/threonine protein kinase 303 422 - -
Eupl10g01159 527 Gene3D Transferase(Phosphotransferase) domain 1 181 246 - -
Eupl10g01159 527 SUPERFAMILY Protein kinase-like (PK-like) 81 450 IPR011009 -
Eupl10g01159 527 FunFam Non-specific serine/threonine protein kinase 58 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01159 Eupl-Chr10 31527311 31548049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01159 1 477 AGC Kinase Gene Family AT4G33080 83.054 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Eupl10g01159 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01159 K08790 - ming:122064853 932.169