Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01140 ATGGAGCCTCGCGTGGGTAACAAATTTCGGCTCGGTCGTAAGATCGGTAGCGGGTCTTTTGGGGAGATCTATCTTGGCACTAACATTCAGACAAGTGAAGAGGTTGCCATTAAGCTCGAAAATGTCAAGACAAAGCATCCCCAATTGCTATACGAATCAAAGTTGTACAGAATCCTACAAGGAGGAACTGGAATTCCAAATGTGAGATGGTTTGGTGTCGAAGGGGACTACAATGTACTTGTGATGGATTTACTTGGACCGAGTCTTGAAGATCTATTCAACTTTTGCAGTAGGAAATTGTCTCTGAAGTCCGTTCTTATGCTTGCGGATCAGATGGTTGGTTTTTATCTATTTTTTGCTTACTATTATACCATTTTATATACTTTATCACTTCCTTTCTGGTGTTCTCAATGTTCCTGTCAGATAAATCGAGTTGAATTTGTTCATGCCAAATCTTTTCTACATCGAGATATCAAGCCAGACAATTTTCTCATGGGCTTGGGGAGGCGTGCCAATCAGGTGTACATCATTGATTTTGGTTTGGCTAAGAAGTACAGAGATACTTCAACCCACCAACACATTCCATATAGAGAAAACAAGAACTTGACTGGAACCGCACGATATGCAAGCATGAACACCCACCTTGGCATTGAACAAAGCCGGAGGGACGATTTAGAATCTCTTGGATATGTTCTTATGTACTTTCTCAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCTGGAACTAAAAAACAAAAGTATGAAAAAATCAGTGAAAGAAAGGTTTCTACATCTATTGAGGCCTTATGTCGGGGTTATCCTACAGAATTTGCATCATACTTCCATTACTGCCGTTCACTCCGGTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGAATATTCCGTGACCTTTTTATTCGTGAAGGTTTTCAGTTTGATTACGTGTTTGACTGGACCATTTTGAAATATCAGCAATCACAGATTGCCACTCCTCCTGCACGTGCTCTTGCCCCCCCTGCTGGAACAAGCTCTGGGTTGGTCCCGGCTCTTGCCAATGCTGACCGACAATCAGGTGGTGAAGAAGGAAGACCATCTGGTTGGTCTTCAATGGATCCCTCTCGTAGGAGAGTCCCAGGGCCAGCTATAAATGCAGGAAGCTTATCTAAGCAGAAGAGTCCAGTTGCGACTGATTCAGCTTTGACTAAAGATGCTATGTTATCTGGTTCCACTTTTATGGGACGGTCAAGTGGATCGTCAAGGCGAGCTGCTGTTTCTAGCAGTCGTGATCCAATGATGGTCGGGAGCGAGTCGGATCCATCTCGCCCTCGAACCACAGAGGCAAGCCCAGGTGCGTTCCGCAAGGTTGCAAGTGGGCAGAGAAGCTCACCCGTTGGTTCCTCAGAGCCCAAGCGCACATCTTCTGGTAGGAACACCTCTAACATAAAGAACTACGAGTCCACTCTCAAGGGCATTGAGTGCCTGAATTTCGACAATGATGAGAGGTTGCAGTATTAA 1518 0.4447 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTSEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMVGFYLFFAYYYTILYTLSLPFWCSQCSCQINRVEFVHAKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISERKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQIATPPARALAPPAGTSSGLVPALANADRQSGGEEGRPSGWSSMDPSRRRVPGPAINAGSLSKQKSPVATDSALTKDAMLSGSTFMGRSSGSSRRAAVSSSRDPMMVGSESDPSRPRTTEASPGAFRKVASGQRSSPVGSSEPKRTSSGRNTSNIKNYESTLKGIECLNFDNDERLQY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01140 505 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Eupl10g01140 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Eupl10g01140 505 ProSiteProfiles Protein kinase domain profile. 9 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01140 505 SUPERFAMILY Protein kinase-like (PK-like) 5 319 IPR011009 -
Eupl10g01140 505 MobiDBLite consensus disorder prediction 353 485 - -
Eupl10g01140 505 CDD STKc_CK1_delta_epsilon 8 311 - -
Eupl10g01140 505 Pfam Protein kinase domain 10 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01140 505 PANTHER CASEIN KINASE-RELATED 9 427 - -
Eupl10g01140 505 FunFam Putative Casein kinase I 1 85 - -
Eupl10g01140 505 FunFam CK1 family protein kinase 134 339 - -
Eupl10g01140 505 MobiDBLite consensus disorder prediction 386 445 - -
Eupl10g01140 505 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Eupl10g01140 505 SMART serkin_6 9 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01140 505 MobiDBLite consensus disorder prediction 460 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01140 Eupl-Chr10 31267577 31281765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01140 7 256 AGC Kinase Gene Family AT3G08730 26.295 2.44e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Eupl10g01140 Pkinase 5.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01140 K02218 - nnu:104586665 860.522