Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01131 ATGGGTGCTTCAGGAAAATGGGTCAAAGCTTTAATTGGTCTTAAAAATTCGGATAAAGACGATCATGAAAAGGTCGGTAGTAGGAGCAGGAAATGGAGGCTTTGGAGGAGCTCTTCAGGCGATCTCGGATCAGGATGGAAGGGTTTAAAAGGAGGGCATAGAGCTGCATCAGAGGCGTCTGATTCTTCATCAGTGTCTGATCCATTTACTGCTGCAGTAGCTACTGTGGTCCGAGCTCCACCAAAAGATTTCAGGTTGGTGAGAGAAGAATGGGCTGCAATCCGGATTCAGACAGCGTTTCGCGGGTTTTTGGCAAGAAGGGCATTGAGGGCCTTGAAAGGAGTGGTAAGGCTTCAGGCTCTTGTTCGTGGCCGTCAAGTGAGGAAGCAAGCTGCTGTGACACTGAGGTGCATGCAGGCACTTGTTCGTGTTCAGGCTCGAGTGAGGGCTAGGTGTGTGCGGATGTCAATGGAGGGTCAAGCCGTGCAGGAGTTACTGAATGATTGCCGCAGCAAGGCAGATCTCCTGAAACAAGCTGAGGAAGGATGGTGTGATCGTCAAGGAACACTAGAAGAAGTTAGAACAAAGCTGCAAATGAGACAAGAGGGAGCCATCAAGAGGGAGAGAGCAATTGCTTACTCCCTCTCTCAACAGCAATGTAAAGCAAACTTGAATTCAAGCTCAAGGCAAAATGTGTCTGTGCCCTCTCTCAAGCATCATGAGCTAGATAAGAGCAGCTGGGGATGGAGCTGGTTAGAACGTTGGATGGCAGCCAAGCCATGGGAGAACAGGTTGATGGAACAAGTCCATGTTGATCCCTCGGAGATGAGCCCATCTTCTAAAAACTGTGAAGACTGTTTTGTTGGTATCCATTCAAAATCTTCTGAACCCACTTCAGTGAAAGTTAGAAAGAACAACGTCACCACCAGGATTTCTGCAAAACCTCCCCTAATTGGGCACGTTACCCGCTCATCTTCAGGCCCAAGTTCTGAAGGTCTGTATGACGTGAGCTCGGGTTCTTCTTCTTCAATCTGTACAACTATGACTCCAGTATCTAGCAACACATTGGCGTCAGAGCGAACGAAGGAGAGTAATAACAGTAGGCCCAGCTATATGAACCTCACTGAGTCTATAAAGTCTAAACAAAAAACTTGCAACTATTCTTCTCATAAAATGCAACGGGAGTTGATGAATGATGTTCAGTTTTATAAGAAGTCAGGAGCATTTTCAAATGGGGATAAGAGCAGTGCTGGTTCTGATCCTTCGGTTAGTTTTTCTAAACCAATCTACTTGCCTACACAGTTGGATAAGAACTTGAGGAGAGACAGGGGAGAACTGTTGTTATGA 1347 0.4655 MGASGKWVKALIGLKNSDKDDHEKVGSRSRKWRLWRSSSGDLGSGWKGLKGGHRAASEASDSSSVSDPFTAAVATVVRAPPKDFRLVREEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARCVRMSMEGQAVQELLNDCRSKADLLKQAEEGWCDRQGTLEEVRTKLQMRQEGAIKRERAIAYSLSQQQCKANLNSSSRQNVSVPSLKHHELDKSSWGWSWLERWMAAKPWENRLMEQVHVDPSEMSPSSKNCEDCFVGIHSKSSEPTSVKVRKNNVTTRISAKPPLIGHVTRSSSGPSSEGLYDVSSGSSSSICTTMTPVSSNTLASERTKESNNSRPSYMNLTESIKSKQKTCNYSSHKMQRELMNDVQFYKKSGAFSNGDKSSAGSDPSVSFSKPIYLPTQLDKNLRRDRGELLL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01131 448 MobiDBLite consensus disorder prediction 322 376 - -
Eupl10g01131 448 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Eupl10g01131 448 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Eupl10g01131 448 MobiDBLite consensus disorder prediction 317 376 - -
Eupl10g01131 448 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Eupl10g01131 448 SMART iq_5 88 110 IPR000048 GO:0005515
Eupl10g01131 448 SMART iq_5 111 132 IPR000048 GO:0005515
Eupl10g01131 448 PANTHER IQ-DOMAIN 5-RELATED 1 417 - -
Eupl10g01131 448 FunFam IQ-domain 11 88 139 - -
Eupl10g01131 448 MobiDBLite consensus disorder prediction 37 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01131 Eupl-Chr10 31196684 31199222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01131 1 437 IQD Protein Family AT2G26180 57.596 8.74e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01131 - - nnu:104600678 630.557