Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01130 ATGGGTTCTCGAACAGATTTCTCTGAATCGAATGGCAACACTGGAAGCAGCAGTATCTGCTGCGTCTCCAACACCGAAACCCGAAACTCCCCAGAAATCTCCACCCCAGAAATCGCAGCTCTAAGACTCCTCTCCGAAAACCTAGGATCAATCTTCGAATCCCCTGATTTCCGTTTCTGCAGTGACGCCAAGATCGTCGTAAGCGACGCCAGAGAAGTCCCCGTTCACCGCTGCATTCTCTCTGCGAGAAGTCCCTTCTTCAAGGCCGTCTTCTCTGGTTCTATTGGAAAGGAGAGAGGTGGTAAGTTTGAATTGAGGGAATTGGTGAAGGATTTCGATGTGGGGTTTGATTCTTTGGTTGCAGTTTTGGCGTATTTGTATAGTGGTAAGGTGAGGCCGTTGCCAGAAGGCGTTTGTGTTTGTGTTGATGACGAGTGTTTGCATGTCGGGTGTCGGCCCGTCGTGGATTTCATGGTGGAGGTGCTCTATGTTTCTTTCACCTTTCAGATTTGGGATTTGGTGACGCTTTTTCAGGGGCGACTTCTTGATATTCTTGACGAGGTGGCAACAGATGACATATTGGTGATTTTATCCGTTGCAAAAATGTGTGATAAAGCTTGTGAGAGATTGCTCACAAAGTGCATTAAGATCGTTGTCGAGTCTGAGATCGATATCGTAATGCTTGAGAAGGCATTGCCCGACGATGTTGTAAAACAAATCATAGATTCACGTTCGGATCTGGGTTTAGGTGGTTCTAAAAGCAATGCTTTTCAAGATAAACATGTGAAGAGAATATATAGGGCTCTGGATTCAGATGACGTTGAATTGGTGGGGATGTTGCTGAAAGAGGCACATACTAGTCTTGATGATGCATATGCGCTACACTATGCAGTAGCGTACTGCGATGCAAAAACTACGACAGATCTTCTTGAGCTTGAGCTTGCTAATGTTAATCATAGGAATCCAAGGGAATACACAGTGCTACATCTTGCTGCTATGCGTAAAGAACCTAAGATACTAGTGTCTCTTCTTACAAAGGGGGCCCGACCATCTGATCTTACATCAGATGGAAGGATAGCACTTCAAATCTCCAAGAGGCTCACCAGGTCTGTGGATTACAATATTTCTACTGAAAAAGGAAAGGCTTCTCCTAAGGATCGGTTATGCATAGAGATATTGGAGCAAGCAGAAAGAAGTGACCCACTACTAGGAGAAGCTTCTGTGTCTCTTGCAATGTCAGGCGATGATCTGCGTATGCAATTGTTGTACCTTGAAAATAGAGTTAGTCTTGCAAAGCTTTTATACCCCATGGAAGCAAAAGTTGCAATGGACATTGCACAAGTGGATGGCACTCTGGAGTTCCCATTAGCTGTCACATCCAGAAATTCACCTGGTAGCAAGAGGGCACTAATGGACTTAAGCAAGGCACATTTCAAGATTGAAGAGGTGCATTTTTGTAGAATGAGAGCGCTCTCCAAAACTGTGGACCTTGGTAGACGCTTTTTCCCTCGTTGCTCAGAGGTACTCAACCAGATTTTGGATGACGACGACTTGTCAGACCTTGCCTACCTCGAGAAGGTCACCCCGGAAGAGCATCTGTTGAAGAAAAGGAGGTTCATGGAGCTCCAGGACGTTCTAGTAAAAGCATTCAATGCAGACAAAGAGGAGCAAGATAGGTCTGCTGCTACGTCGTCGTCATCATCGTCAACAGCCATAGGAGTGGTGAGGTCTAATAAAAGGCTCACCCCCAAGAAAGAATATAAATAA 1767 0.4527 MGSRTDFSESNGNTGSSSICCVSNTETRNSPEISTPEIAALRLLSENLGSIFESPDFRFCSDAKIVVSDAREVPVHRCILSARSPFFKAVFSGSIGKERGGKFELRELVKDFDVGFDSLVAVLAYLYSGKVRPLPEGVCVCVDDECLHVGCRPVVDFMVEVLYVSFTFQIWDLVTLFQGRLLDILDEVATDDILVILSVAKMCDKACERLLTKCIKIVVESEIDIVMLEKALPDDVVKQIIDSRSDLGLGGSKSNAFQDKHVKRIYRALDSDDVELVGMLLKEAHTSLDDAYALHYAVAYCDAKTTTDLLELELANVNHRNPREYTVLHLAAMRKEPKILVSLLTKGARPSDLTSDGRIALQISKRLTRSVDYNISTEKGKASPKDRLCIEILEQAERSDPLLGEASVSLAMSGDDLRMQLLYLENRVSLAKLLYPMEAKVAMDIAQVDGTLEFPLAVTSRNSPGSKRALMDLSKAHFKIEEVHFCRMRALSKTVDLGRRFFPRCSEVLNQILDDDDLSDLAYLEKVTPEEHLLKKRRFMELQDVLVKAFNADKEEQDRSAATSSSSSSTAIGVVRSNKRLTPKKEYK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01130 588 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 234 387 - -
Eupl10g01130 588 Gene3D Potassium Channel Kv1.1; Chain A 28 219 IPR011333 -
Eupl10g01130 588 Pfam BTB/POZ domain 59 132 IPR000210 GO:0005515
Eupl10g01130 588 SUPERFAMILY Ankyrin repeat 255 365 IPR036770 -
Eupl10g01130 588 ProSiteProfiles BTB domain profile. 61 135 IPR000210 GO:0005515
Eupl10g01130 588 MobiDBLite consensus disorder prediction 553 588 - -
Eupl10g01130 588 MobiDBLite consensus disorder prediction 561 576 - -
Eupl10g01130 588 SMART BTB_4 61 185 IPR000210 GO:0005515
Eupl10g01130 588 Pfam NPR1/NIM1 like defence protein C terminal 365 569 IPR021094 -
Eupl10g01130 588 Gene3D - 257 379 IPR036770 -
Eupl10g01130 588 Pfam Domain of unknown function (DUF3420) 223 266 IPR024228 -
Eupl10g01130 588 SUPERFAMILY POZ domain 57 183 IPR011333 -
Eupl10g01130 588 CDD BTB_POZ_NPR_plant 42 185 - -
Eupl10g01130 588 FunFam Non-expressor of PR1 35 220 - -
Eupl10g01130 588 PANTHER REGULATORY PROTEIN NPR3 8 578 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01130 Eupl-Chr10 31180367 31192023 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl10g01130 NPR1_like_C 2.6e-86 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01130 K14508 - nnu:104600680 809.675