Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01129 ATGGAAAGAATAACAGTTAAAGAAGAGGAAGTGGTTGTGGTCGGTGGTAGTGGGTTTTCTTCTTCTTCCTCAGACTTTCCCCCGCAACCCATGGGGGGCTTACACGATGCGGGTCCGCCTCCATTCCTCACCAAGACCTTCGAAATGGTCGAAGACCCGGAAACTGACTCGGTGGTATCTTGGAGCAGAGCTCGTAACAGCTTCATTGTCTGGGATTCACACCAGTTCGCCATCAATCTTCTCCCCAGATACTTCAAGCACAATAATTTCTCCAGCTTTGTTCGCCAGCTCAACACATATGGTTTTAAAAAGGTTGATCCAGATCGATGGGAGTTTGCGAACGAAAGGTTTTTGGGCGGCCATAAGCATTTGTTGAAGGACATCAAGAGGAGAAGACATGTCTCTCAGAACATGCAACAACAAGGAGTAGGAGCTTGTGTTGAATTGGGACAGTATGAGCTAGAAGGCGAAATCGACAGATTGAAGAGGGATCGAAGTGGACTTATGGTGGAAGTTGTGAAGCTGAGGCAGCAACAGCAGAACTACCGGGAACAACTCGTTGCGATTGAAGAACAGTTACAAGGTACTGAGAGGAAGCAGCAACAAATGATGGATTTTCTGGCCAGAGTTCTGAAGAACCCAGCTTTCATCCAACAACTAATTCAGCAGAACAAGCAGAAAATAGAATTAGATGGTGAAGGAATTGGGAAGAAACGTAAATTGCACGCCAGTCAAAGCCCACAAATCTTGCAAGAGGAAGGACTATTGGAGGCCATGCGTCTTACCCAGATTGCCAATTTTACAGATCAAGACCTAGAAGAGGAGGAAATTATTGAACCGGAGATTGAAACAATATTCTCTACTTCTGTCGAAAATGAATCAAGCAGCCCTACTCAATATCAGAGTCCCAGAGTGGTCTCTGGTACGAGTGATCCGGATTTGAGCTCTGCCAGTGATATAATGTGGGAGTATTTACTGAATGAGGACCTGATCATGGGTAATGAAGAGGAAGAAGTAGAGTTAGGGGTTCAATCGCTAATTGATGTTGAAGTGGAGGATTTGGTTGCAAAGACGCCCCATTGGGGACAAGACTTAGTGGAGCAAATGGGGTTCCTGGGGCCGACGCCATGA 1131 0.4607 MERITVKEEEVVVVGGSGFSSSSSDFPPQPMGGLHDAGPPPFLTKTFEMVEDPETDSVVSWSRARNSFIVWDSHQFAINLLPRYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANERFLGGHKHLLKDIKRRRHVSQNMQQQGVGACVELGQYELEGEIDRLKRDRSGLMVEVVKLRQQQQNYREQLVAIEEQLQGTERKQQQMMDFLARVLKNPAFIQQLIQQNKQKIELDGEGIGKKRKLHASQSPQILQEEGLLEAMRLTQIANFTDQDLEEEEIIEPEIETIFSTSVENESSSPTQYQSPRVVSGTSDPDLSSASDIMWEYLLNEDLIMGNEEEEVELGVQSLIDVEVEDLVAKTPHWGQDLVEQMGFLGPTP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01129 376 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 263 IPR027725 -
Eupl10g01129 376 Coils Coil 158 199 - -
Eupl10g01129 376 FunFam Heat shock transcription factor 1 35 132 - -
Eupl10g01129 376 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g01129 376 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g01129 376 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g01129 376 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g01129 376 MobiDBLite consensus disorder prediction 288 312 - -
Eupl10g01129 376 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
Eupl10g01129 376 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g01129 376 Gene3D - 35 132 IPR036388 -
Eupl10g01129 376 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01129 Eupl-Chr10 31173316 31179145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01129 28 376 HSF AT2G26150 47.324 6.42e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl10g01129 HSF_DNA-bind 1.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01129 K09419 - ming:122083635 456.062