Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01117 ATGCTGAAGCTGTTTTCCCTGCTTCTCCTACTCTTCCTTCTCTTCTCTTTCTCATCCTCTAACTCTGATTTTGATTCCTTACTCGCATTCAAGACCTCTTCAGACCTCTCAAACTCGCTCTCCTCCTGGTCTAACTCGTCTTACCCCTGCTCCGGCTCATGGCTTGGCGTCACCTGCAACAATAACAACCGAGTCACACGACTCGTCCTCGAAAACCTCAACCTCACTGGTTCCATCAAAACCCTAACCCACCTCAACCACCTCAGACTCCTAAGCCTCAAACACAACAACCTCTCTTCCTCCTTAGACTTCTCCTCATGGAAGAACATCAAGCTTCTTTACCTCTCCCACAACCAATTCTCCGGAAACTTTCCCTCCGGAATCTCTCAGCTCCGCCGTCTCCGCCGCTTCGATCTCTCCCACAATCGTCTCTCCGGTCACATTCCGATCACCCAACTCATCCAGCTACTACATTTACTAACACTTCGTCTCGAAGCGAATTCCTTCACCGGATCACTACCATCAGCTGCAACTGATACCTTCAAAACTCTCTTGGATTTCAATGTCTCTGATAACAATCTTTCCGGAGAAATTCCGAAATCGTTCTCTTCGTTTGCTTCGTCATGTTTTACTGGCAACAAGAATCTCTGCGGAGAACCATTACCGATCAAATGCTTGAATCGAACGGTCCGGAATGATCCGGTCTCAATTAGGGTTCCTCAAGATCAAGGGGGGAATAAATTGAGTCGTCATCTAATAGTACTTGGAATTATAATTGCAGATGTTTCTGTAGTCGTTGCGATGATGATCGGGATTCTCTTGTATTGTAGGAATCGACGGCTAAGAAATCATGAGCACGGAAGAGAGAAAGTTAGAGAGAAAGTTAGTAGTTATGGTGTAGGGAGGGATCAGGAGGATCAGGAGATGATGTACTTTGAAGGGTGTAAGAGTTTCATGGTGGATGATCTGTTGAAGTCTTCGGCTGAGATGTTGGGGAAGGGGAGTGTGGGGACCACTTATAAGGTTTTGATGGACAGTGGAGATGTGGCTGTGGTTAAGAGGACGAAGGTGAGGAGGAAGAAGAAGGAGATCGAAGGGCTGTTGAGAGAGATTGGAGTGTTGAGACACGGTAATATCGTGAGCCTCAGGGCTTATTACTGCTCCAAAGAAGAGTTGCTGTTGGTCTACGATTTCCTACCCAACGGGAGCCTACATTCTCTCTTACACGGAAATCGGGGGCCCGGAAGAACTCCCTTAGATTGGACCACTAGGTTGAAACTCGCATCTGACACGGCTAACGGCCTCACATTCCTCCATAGTGCATGCAAATCCAGGCTAGCTCATGGACACCTCACGTCGTGGAATGTCGTAATTGATCAAGAGGGCAATGCTTGCATCTCTGATGTCGCTCTCCACCAGCTCTTTCTCTCACCATCACTATCAAACAATGGATACAACGCTCCCGAATTGATGCTCAATACCCATGACCCAAAGAAATTCTCTCACAGCTGCGATGTTTATAGCTTTGGAGTAATTCTGTTAGAGATCTTGACGGGGAAAATGGCGACAGGCGAAGGAGAAACAAGTTTATTAGCCAAGTGGGTGCAATCAGTGGTTCGAGAGGAATGGACATCGGAGGTGTTCGATATCGAACTCCTTCGATACAAGGAGATGGAAGAAGAGATGATGGCTCTCCTACAAGTAGCCTTGCTTTGCTTGGTCCCATTGCCACGAGATCGTCCTAAGATGAGCATTGTGCATAAGATGATTGAAGAAATCAAATCAAGGGGATACAGAGGAAGAGGGGCCCATTCCCCTTCTCACAATGATCTCTCTTCTCATTCCTCCCCTTCTCCATCAGAAGACACTCCCCCCTTCACTAGTAGCTGA 1890 0.4725 MLKLFSLLLLLFLLFSFSSSNSDFDSLLAFKTSSDLSNSLSSWSNSSYPCSGSWLGVTCNNNNRVTRLVLENLNLTGSIKTLTHLNHLRLLSLKHNNLSSSLDFSSWKNIKLLYLSHNQFSGNFPSGISQLRRLRRFDLSHNRLSGHIPITQLIQLLHLLTLRLEANSFTGSLPSAATDTFKTLLDFNVSDNNLSGEIPKSFSSFASSCFTGNKNLCGEPLPIKCLNRTVRNDPVSIRVPQDQGGNKLSRHLIVLGIIIADVSVVVAMMIGILLYCRNRRLRNHEHGREKVREKVSSYGVGRDQEDQEMMYFEGCKSFMVDDLLKSSAEMLGKGSVGTTYKVLMDSGDVAVVKRTKVRRKKKEIEGLLREIGVLRHGNIVSLRAYYCSKEELLLVYDFLPNGSLHSLLHGNRGPGRTPLDWTTRLKLASDTANGLTFLHSACKSRLAHGHLTSWNVVIDQEGNACISDVALHQLFLSPSLSNNGYNAPELMLNTHDPKKFSHSCDVYSFGVILLEILTGKMATGEGETSLLAKWVQSVVREEWTSEVFDIELLRYKEMEEEMMALLQVALLCLVPLPRDRPKMSIVHKMIEEIKSRGYRGRGAHSPSHNDLSSHSSPSPSEDTPPFTSS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01117 629 SUPERFAMILY Protein kinase-like (PK-like) 328 590 IPR011009 -
Eupl10g01117 629 SUPERFAMILY L domain-like 20 207 - -
Eupl10g01117 629 MobiDBLite consensus disorder prediction 606 629 - -
Eupl10g01117 629 Gene3D Transferase(Phosphotransferase) domain 1 399 604 - -
Eupl10g01117 629 Pfam Protein kinase domain 329 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01117 629 FunFam Nuclear pore complex protein NUP107 20 175 - -
Eupl10g01117 629 ProSiteProfiles Protein kinase domain profile. 325 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01117 629 Gene3D Ribonuclease Inhibitor 106 227 IPR032675 -
Eupl10g01117 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 595 IPR046959 -
Eupl10g01117 629 Pfam Leucine rich repeat N-terminal domain 443 465 IPR013210 -
Eupl10g01117 629 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Eupl10g01117 629 Gene3D Ribonuclease Inhibitor 15 105 IPR032675 -
Eupl10g01117 629 Gene3D Phosphorylase Kinase; domain 1 303 398 - -
Eupl10g01117 629 MobiDBLite consensus disorder prediction 596 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01117 Eupl-Chr10 31025572 31028727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01117 22 629 Receptor kinase-like Gene Family AT1G68400 46.049 4.48e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl10g01117 Pkinase 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01117 - - nnu:104586636 720.309