Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01112 ATGTGGATGCAATTAGTTCTTCTGGTGCTGAAACTCTGCGTTGTTGTCGTTGCTTCGGTAGTTCATGGATCTGCAGGGTTCAATATCTCCCCTTCACCAGCAATTTTTTCTGCGGTTCCTCCTATTGAAGAAAGAACACCTGGTCTCGGCCAGCATGGAAAATCACTGAGACCCAGCATGCCAAGTGCATCACCTCTGCCTAATGGATCAGTTTTGCATTCGCAGATGATATCACCACCCTATAAGTCTGCACCTGTGCCCCAAAACATGCAAGTGCTAGTGCCATATCTGCCGCCGAGTCCACCAACAGTACTGCCATCACATAAGTCAGCACCTCTGCCTCAAACTACCCAAGGGCTTGCACCATCCATGCCATCAAGTGCTCCTTCTCATAGAACAGCACCAGATATTAAACTCCCTATCACAGTGCCACTTGCTTCAGAGCCTGCTGTCTCTTCAATATCAGCTCCTCCCCCCAGCATCAATAGGAAGAGATATGGAATGCCAGTTGCTGTGCCTCCAAGTGAAACGGTCAACCATTTATCACCTGTCAACCATTCTCCAACTCAAGATTACTTTCCTATTGCAGCCCCTGCGCCACACAAAGCCACGAGGTCCTCTAATGTTCCTGCACCGTCCAAGTTATCTCCTAAACCCCCAGCAAGGAAATGGGTTCATAGTCCTGCATCTTCACCTTCAATCTCATCTTATAAGCATCATCATGCAAGGAAAAAAGCCAGCAGCCCTGCTCTTGCACCATCATATCTGTTTCCACCGCCACCTTCCCACCACCAAGGTACGGTCATCCCTCCGACCCCTTCACATCTTCCAAAAATACTCCCAAAGAAAAGTAGGAAAAGGCACCATGGTCCTCCACCCATGAACTATGGCCCTTCTGTCTCCCCAGTTCAACCTCCCTTTCCTTCAACAGTGAGCCAGGTTTCACCTGTGTCTTCGCCGTCATCAACAGTTCCATCTGGCCGAAAAAATAGGACTGCTCTCCCCCCCACAATTTCTCCTTCAGGATCTTCCCCAAGTAACTCGAAGAAGCCATTGCCATCACCAGTTGAAGCACTGCCACCACCACCCCCTGATCAAGATTGTACATCAGTTACATGTACAGAGCCGTTAACAAATACCCCTCCTGGATCACCCTGTGGCTGTGTGTGGCCGATGCAAGTTGGATTGCGTCTTAGTATTGCACTATACACTTTCTTCCCTTTGGTTTCAGAGCTGGCCGAGGAAATAGCGACCGGAGTTTTCATGAAACAAAGTCAAGTTCGCATAATGGGAGCAAATGCAGCCAGTCAGCAGCCGGAGAAGACTATCGTCCTTATTGATCTGGTACCACTTGGAGAAAAATTTGATAATACTACAGCATTTTTTACCTTCGAAAAGTTCTGGCTCAGGCAGGTTCTCATAAAGACTTCCTTCTTTGGCGACTATGAAGTATTATATGTACGCTATCCAGGTCTTCCTTCCTCACCGCCTTTGGCACCCTCAAGCATTACTACTATGGATGAAGGGCCGTACTCTGGCCATGGAAATAATGCAAGGACAATAAAACCTCTGGGGGTTGATGTGAGGAGGAAACGGAAAGAAGGCCTCGGTGGCAGCATGATTGCTATCATAGTTCTATCATCTTCTATAGCTGTGGTTTTATGCATTGGAGTTGCTTGGTTTTTGCTATTGAAACGTGGAGACCATACTCATCCACCGGCACCAACTCCACAGGCCTTAGTACCTTCCCATGCGAAGCCATCAGGTGCTGCTGGGTCTATAATGTTTGGAAGTGGGCCCAGTTCTGCATCACTGTCCTTTGGCTCTAGCATCGCAACATATACGGGGTCTGCTAAGACTTTCAGTGCAGGGGAGATGGAGAGAGCCACTGATAACTTTGATGATTTGAGAATAATCGGGGAAGGTGGCTTTGGGCGTGTGTACAGTGGTATCCTCGACGATGGAACAAAGGTAGCTGTAAAGGTTCTTAAGAGGGATGATCAGCAGGGTGGAAGGGAATTCTTAGCCGAGGTTGAGATGCTTAGCCGTCTGCATCACAGAAACTTGGTCAAGTTGATTGGTATATGCACAGAGGACCATACCCGCTGCCTGGTCTATGAACTAATTCCAAATGGCAGTGTGGAGTCCCATTTACATGGAGTGGACAAGGAAACTGCTCCTCTTGACTGGGGGGCCCGAATAAAGATTGCACTCGGTGCAGCTCGAGGTCTAGCTTATCTGCACGAAGACTCAAGCCCCCGTGTTATTCATCGGGATTTCAAGTCCAGCAACATCTTGTTGGAACAGGATTTTACTCCCAAAGTTTCTGATTTTGGCTTGGCTAGAACAGCTTTGGACGAGGATAACACGCACATCTCAACACGTGTTATGGGAACTTTTGGTTATGTAGCTCCAGAATATGCAATGACCGGGCATCTTCTCGTCAAGAGTGATGTTTACAGCTATGGTGTAGTCCTTCTTGAGCTCCTAACAGGAAGAATACCTGTGGACATGTCACAGCCACGAGGTCAAGAGAACTTGGTTGCTTGGGCTCGCCCACTCCTCACAAGTAAGGAGGGGTTAGAGATGATCATCGATCCAGCTCTAGTGTCTAATTTTCTGTTTGATAGCGTGGCTAAGGTGGCAGCTATAGCTTCAATGTGTGTGCAGCCAGAAGTCTCTCACCGTCCATTTATGGGTGAGGTTGTTCAAGCCTTGAAGCTAGTGTGTAACGAGTGTGATGAGGCCAAACAAGCAGGATCAGGAAGTTGTAGCCAAGAGGACTTGTCTGTTCTAGATGTGGATACTAGGACCAGTACTGGTTCAGGTCAGCTTCCGGAACCTTCACGTGCCCATTATCCAATGCAGGACTATGATTCCTATCTTGATGTCAATAGGGAACTATCGGCATCAGATGTATTCAGTACATCAGCAAGATTTGGGAGACAGGCATCGGGGTCTTTTAGGAGGCATTCCAGCTCAGGGCCTCTGCGAACAGGGAGGAGCAGACATTTCTGGCAGAGACTAAGAGGCTTGTCTAGAGGCAGTGTGAGCGAGCATGGAGTTGCATTCAGGTTAGGGGCAGGGTCCTGTTGA 3096 0.4832 MWMQLVLLVLKLCVVVVASVVHGSAGFNISPSPAIFSAVPPIEERTPGLGQHGKSLRPSMPSASPLPNGSVLHSQMISPPYKSAPVPQNMQVLVPYLPPSPPTVLPSHKSAPLPQTTQGLAPSMPSSAPSHRTAPDIKLPITVPLASEPAVSSISAPPPSINRKRYGMPVAVPPSETVNHLSPVNHSPTQDYFPIAAPAPHKATRSSNVPAPSKLSPKPPARKWVHSPASSPSISSYKHHHARKKASSPALAPSYLFPPPPSHHQGTVIPPTPSHLPKILPKKSRKRHHGPPPMNYGPSVSPVQPPFPSTVSQVSPVSSPSSTVPSGRKNRTALPPTISPSGSSPSNSKKPLPSPVEALPPPPPDQDCTSVTCTEPLTNTPPGSPCGCVWPMQVGLRLSIALYTFFPLVSELAEEIATGVFMKQSQVRIMGANAASQQPEKTIVLIDLVPLGEKFDNTTAFFTFEKFWLRQVLIKTSFFGDYEVLYVRYPGLPSSPPLAPSSITTMDEGPYSGHGNNARTIKPLGVDVRRKRKEGLGGSMIAIIVLSSSIAVVLCIGVAWFLLLKRGDHTHPPAPTPQALVPSHAKPSGAAGSIMFGSGPSSASLSFGSSIATYTGSAKTFSAGEMERATDNFDDLRIIGEGGFGRVYSGILDDGTKVAVKVLKRDDQQGGREFLAEVEMLSRLHHRNLVKLIGICTEDHTRCLVYELIPNGSVESHLHGVDKETAPLDWGARIKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEQDFTPKVSDFGLARTALDEDNTHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRIPVDMSQPRGQENLVAWARPLLTSKEGLEMIIDPALVSNFLFDSVAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNECDEAKQAGSGSCSQEDLSVLDVDTRTSTGSGQLPEPSRAHYPMQDYDSYLDVNRELSASDVFSTSARFGRQASGSFRRHSSSGPLRTGRSRHFWQRLRGLSRGSVSEHGVAFRLGAGSC* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01112 1031 Pfam Protein tyrosine and serine/threonine kinase 637 906 IPR001245 GO:0004672|GO:0006468
Eupl10g01112 1031 Gene3D Transferase(Phosphotransferase) domain 1 709 928 - -
Eupl10g01112 1031 CDD STKc_IRAK 639 907 - -
Eupl10g01112 1031 Gene3D Phosphorylase Kinase; domain 1 608 708 - -
Eupl10g01112 1031 FunFam receptor-like serine/threonine-protein kinase ALE2 606 708 - -
Eupl10g01112 1031 FunFam Receptor-like serine/threonine-protein kinase ALE2 709 926 - -
Eupl10g01112 1031 PANTHER OS01G0750732 PROTEIN 360 930 - -
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 46 66 - -
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 109 130 - -
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 306 351 - -
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 191 376 - -
Eupl10g01112 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Eupl10g01112 1031 ProSiteProfiles Protein kinase domain profile. 633 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g01112 1031 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 103 132 - -
Eupl10g01112 1031 SUPERFAMILY Protein kinase-like (PK-like) 613 906 IPR011009 -
Eupl10g01112 1031 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01112 Eupl-Chr10 30970111 30977400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01112 78 1028 Receptor kinase-like Gene Family AT5G56890 55.102 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl10g01112 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01112 - - nnu:104586631 1276.15