Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01106 ATGGGGTTCTACATCTATGTGTATGGGTTTCCGATCTACATCAATGTGGATGAACTGCTAATGATGGCTGCGAATGCAGCCATGAATTACTGGTCCTATAAATCTTATGTCCAACACTTCGATCCGTCTGGGGATCCAAACAGGAAAACCCGAGGACAGAAAAAGGAAATCGCCAAGCGATTAGGTCGCCGTGTGTCTACCAATATCTACGAGGATCAAATAATATATGATGTTGAAAATCCAGACCGTATTGATGCAAAGTTTGAGTCTATTGGAGGGTTTGAAAATGTGAAGCGATCTTTATATGAATCAGCGATTCTTCCATTAAAGAGACCTGAATTGTTTGCACATGGGAAGCTTCTCAAACCACAGAAGGGGATATTGTTGTATGGACCACCTGGAACTGGTAAGACCACGCTTGCCAAGGCATTAGCAAAGGAGTTTGGAGCTGTATTCATTAATTTGAAGATGTCTACTATAATGGGCAAATGGCATGGTGATTCAGAAAAACTTGTGAGTGCTGTATTCAGTTTGGCGAATAAGCTCCAGCCTGCTATTATATTTATTGATGAAGTCGATAGTTTTTTGGGACGACGCGATTCCATTAATGATGCAGTCACGAACAGAATGAAAACCGAGTTCATGGCTTTGTGGGATGGTTTTACAACAGACCAGAATGCTCGGGTTATGGTCCTTGCTGCAACCAACCGCCCATCAGACCTTGACGAGGCAGTACTCCGGCGTCTTCCCCTGGCCTTTGAGATTGGCTTACCCAATTGCAGCGAGAGAGTCTCGATATTGAAGGTGATTTTGAAGGGTGAGAATATGGAAGATGACATCGATTTTGACCACATAGCCAGCTTGTGCGATGGGTACGCTGGTTCAGATCTTCTTGAACTCTGCAAGCAGGCTGCCTATTTACCTATCAGGGAACTACTATGTGACGAAATGAACGGCAATCCATCTCATGATCAAATAATCTATGATGTTGAAAATCCAGACCGTATTGATGCAAAGTTTGAGTCTATTGGAGGGTTTGAAAATGTGAAGCGATCTTTATATGAATCAGCGATTCTTCCATTAAAGAGACCTGAATTGTTTGCACATGGGAAGCTTCTCAAACCACAGAAGGGGATATTGTTATATGGACCACCTGGAACTGGTAAGACCACGCTTGCCAAGGCATTAGCAAAGGAGTTTGGAGCTGTATTCATTAATTTGAAGATGTCTACTATAATGGGCAAATGGCATGGTGATTCAGAAAAACTTGTGAGTGCTGTATTCAGTTTGGCGAATAAGCTCCAGCCTGCTATTATATTTATTGATGAAGTCGATAGTTTTTTGGGACGACGCGATTCCATTAATGATGCAATCATGAACAGAATGAAAACCGAGTTCATGGCTTTGTGGGATGGTTTTACAACAGACCAGAATGCTCGGGTTATGGTCCTTGCTGCAACCAACCGCCCATCAGACCTTGACGAGGCAGTACTCCGACGTCTTCCCCTGGCCTTTGAGATTGGCTTACCCAATTGCAGCGAGAGAGTCTCGATATTGAAGGTGATTTTGAAGGGTGAGAATATGGAAGATGACATCGATTTTGACCACATAGCCAGCTTGTGCGATGGGTACGCTGGTTCAGATCTTCTTGAACTCTGCAAGCAGGCTGCCTATTTACCTATCAGGGAACTACTATGTGACGAAATGAACGGCAATCCATCTCATACACCAAGGCTTCTCTCACAATCAGATCTAGAGAAAGTTCTTTCCACATCAAAAAAGACGAGTGTTGCAGCAAGAGAGTACAATGAAAGAAAGAACAGCCTTAACCAGGCCATTGAGAGTTTTATGTATATATAG 1860 0.4312 MGFYIYVYGFPIYINVDELLMMAANAAMNYWSYKSYVQHFDPSGDPNRKTRGQKKEIAKRLGRRVSTNIYEDQIIYDVENPDRIDAKFESIGGFENVKRSLYESAILPLKRPELFAHGKLLKPQKGILLYGPPGTGKTTLAKALAKEFGAVFINLKMSTIMGKWHGDSEKLVSAVFSLANKLQPAIIFIDEVDSFLGRRDSINDAVTNRMKTEFMALWDGFTTDQNARVMVLAATNRPSDLDEAVLRRLPLAFEIGLPNCSERVSILKVILKGENMEDDIDFDHIASLCDGYAGSDLLELCKQAAYLPIRELLCDEMNGNPSHDQIIYDVENPDRIDAKFESIGGFENVKRSLYESAILPLKRPELFAHGKLLKPQKGILLYGPPGTGKTTLAKALAKEFGAVFINLKMSTIMGKWHGDSEKLVSAVFSLANKLQPAIIFIDEVDSFLGRRDSINDAIMNRMKTEFMALWDGFTTDQNARVMVLAATNRPSDLDEAVLRRLPLAFEIGLPNCSERVSILKVILKGENMEDDIDFDHIASLCDGYAGSDLLELCKQAAYLPIRELLCDEMNGNPSHTPRLLSQSDLEKVLSTSKKTSVAAREYNERKNSLNQAIESFMYI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01106 619 Gene3D - 85 257 IPR027417 -
Eupl10g01106 619 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 131 150 - -
Eupl10g01106 619 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 513 531 - -
Eupl10g01106 619 FunFam ATPase family AAA domain-containing protein 1 337 513 - -
Eupl10g01106 619 FunFam ATPase family AAA domain-containing protein 1 85 261 - -
Eupl10g01106 619 ProSitePatterns AAA-protein family signature. 229 248 IPR003960 GO:0005524|GO:0016887
Eupl10g01106 619 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 320 603 - -
Eupl10g01106 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 564 IPR027417 -
Eupl10g01106 619 Gene3D - 337 595 IPR027417 -
Eupl10g01106 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 311 IPR027417 -
Eupl10g01106 619 SMART AAA_5 375 513 IPR003593 GO:0016887
Eupl10g01106 619 SMART AAA_5 123 261 IPR003593 GO:0016887
Eupl10g01106 619 Pfam AAA+ lid domain 531 563 IPR041569 -
Eupl10g01106 619 Pfam AAA+ lid domain 279 311 IPR041569 -
Eupl10g01106 619 Pfam ATPase family associated with various cellular activities (AAA) 379 508 IPR003959 GO:0005524|GO:0016887
Eupl10g01106 619 Pfam ATPase family associated with various cellular activities (AAA) 127 256 IPR003959 GO:0005524|GO:0016887
Eupl10g01106 619 ProSitePatterns AAA-protein family signature. 481 500 IPR003960 GO:0005524|GO:0016887
Eupl10g01106 619 Gene3D - 510 590 - -
Eupl10g01106 619 Gene3D - 258 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01106 Eupl-Chr10 30901080 30919108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01106 340 565 Calmodulin-binding Proteins AT3G56690 36.522 5.16e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01106 K22530 - ming:122085525 425.246