Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01105 ATGGCGATCACTCAGCAACTGTTAGAGCAACTGCTAATTATGGCAGCAAAATCAGCCATGAGTTTCTGGCTCTTTAAAACGTGTATTGGAGAAATACGTAATCTCGGTGGAAACAAGAAAGCCAGAGGACAGCGGAAAAATGAAATCGCCAACCGATTAGGTCGCCCTGTATACCATACCAATTCCTACGAGGATGTAATAATCTGCGACGTTGTAAATCCTGATCATATTGATGTAAAGCTTGACTCTATTGGAGGCTTTGAAAATGTTAAGCGAGCATTATATGAATCAGCGATTCTTCCACTAAAGAGACCTGATTTGTTTGCACACGGGAAGCTTCTTAAGCCACAAAAGGGGATATTGTTGTATGGACCACCTGGAACTGGTAAGACCACGCTTGCCAAGGCATTAGCAAAGGAGTCTGGAGCTGTATTCATTAACGTCAAGATGTCTACTTTGATGGGCAAATGGTTTGGTGATTCAGAAAAACTTGTGGCTGCTGTATTCAGTTTGGCGAATAAGCTCCAGCCTGCTATTATATTCATTGATGAGGTTGATAGTTTTTTGGGACAGCGCCATGCTACAGACCATGCAACCTCGACCAGAATGAAAACCGAGTTCATGGCTTTGTGGGATGGTTTTACAACAGACCAGAATGCTCGGGTTATGGTCCTTGCTGCAACCAACCGACCAGGAGATCTTGACGAGGCAATACTCCGGCGTCTTCCCCAGGCCTTTGAGATTGGCTTACCCAATTGCAGTGAGAGAGCCACGATATTGAAGATGATTTTGAAGGGTGAGAACGTCGAAGATAACATCGATTTTGACCACATAGCCAGCTTGTGCAAGGGGTACGCTGGTTCAGATCTCCTTGAACTCTGTAAGCAAGCTGCCTACTTTCCTATCAGGGACCTACTATGTGACGAAATAAACGGCAAGCCATCTTATATACCAAGGCTTCTCTCACAATCAGATATAGAGGAAGTTCTTTGCACATCAAAAAAGACGAGTGTTGCAGCAAGAGAGTACAGTAGGTTAAGCTCCCAAACACTACCATGCTCAAGAAACAGGGGTGAGGCAGCTTCGGTTGAAAATGCAATCTCGGTGCTCGCTAAGATTGTTGATGGCGTATCTAGAAGAAAGAGGAGTTTGAGGATCAAACGCCTCACATAG 1173 0.4459 MAITQQLLEQLLIMAAKSAMSFWLFKTCIGEIRNLGGNKKARGQRKNEIANRLGRPVYHTNSYEDVIICDVVNPDHIDVKLDSIGGFENVKRALYESAILPLKRPDLFAHGKLLKPQKGILLYGPPGTGKTTLAKALAKESGAVFINVKMSTLMGKWFGDSEKLVAAVFSLANKLQPAIIFIDEVDSFLGQRHATDHATSTRMKTEFMALWDGFTTDQNARVMVLAATNRPGDLDEAILRRLPQAFEIGLPNCSERATILKMILKGENVEDNIDFDHIASLCKGYAGSDLLELCKQAAYFPIRDLLCDEINGKPSYIPRLLSQSDIEEVLCTSKKTSVAAREYSRLSSQTLPCSRNRGEAASVENAISVLAKIVDGVSRRKRSLRIKRLT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01105 390 FunFam ATPase family AAA domain-containing protein 1 78 254 - -
Eupl10g01105 390 Pfam ATPase family associated with various cellular activities (AAA) 120 249 IPR003959 GO:0005524|GO:0016887
Eupl10g01105 390 ProSitePatterns AAA-protein family signature. 222 241 IPR003960 GO:0005524|GO:0016887
Eupl10g01105 390 Gene3D - 78 335 IPR027417 -
Eupl10g01105 390 Gene3D - 251 331 - -
Eupl10g01105 390 Pfam AAA+ lid domain 272 304 IPR041569 -
Eupl10g01105 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 304 IPR027417 -
Eupl10g01105 390 SMART AAA_5 116 252 IPR003593 GO:0016887
Eupl10g01105 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 53 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01105 Eupl-Chr10 30894459 30898234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01105 79 330 Calmodulin-binding Proteins AT3G56690 35.409 3.95e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01105 K22530 - ming:122082602 501.13