Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01086 ATGAGCAGCAAAGAGAAGAGAATGGCCCCCAAAGGGAAGAAGAAGGGAGCGAGCTTCGTGATAGACTGCGGGAAGCCCGTAGAAGACAAGATAATGGACATCGCCTCCCTAGAGAAGTTCCTGCAGGAGCGGATCAAGGTCGGAGGCAAAGCCGGGGCCCTCGGAGATGCCATCACCATCTCCCGCGACAAGAACAAAATCATTGTCACCTCCGACAACCCCTTCTCCAAGAGATACTTGAAGTATTTAACGAAGAAGTACTTGAAGAAGCACAATGTGAGGGACTGGCTGCGAGTCATTGCATCCAACAAAGACCTCAACGTCTATGATTTGCGATACTTCAACATTGCTGAGAACGAGGCGGACGAAGAGGATTGA 378 0.5053 MSSKEKRMAPKGKKKGASFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAITISRDKNKIIVTSDNPFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDLNVYDLRYFNIAENEADEED* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01086 125 Pfam Ribosomal L22e protein family 15 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl10g01086 125 Gene3D - 6 125 IPR038526 -
Eupl10g01086 125 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl10g01086 125 FunFam 60S ribosomal protein L22-2 6 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01086 Eupl-Chr10 30698746 30702656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01086 10 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 81.897 2.95e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01086 K02891 - nnu:104600743 202.216