Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01081 ATGCTTTGGGACGATGAAACATCCTTACCAATCATCAAGAACAAAGGAGTGATGAGGACCCACGACGAAGATGCCTTTGAATACTTCAAGCATACGAAGGTGGTATGCAGATTGTGCCCCAGGTTACACCACATGTTCCCGACGCTCTTTGCTCACCATCAGAAGACCATCACTGTGGACACCCAAGCACAATTTCTCTCAACTAGTGATGGTGATTGTATTAATGAATACTATCGTAGTAGTAGTAGAGAAATCACGAGTTTCATCGGTGGGTTGGATCTTTGTGATGGTCGCTATGATACAGAAGAGCATTCCTTGTTTCGAACACTTAACGACGAATCCCATGCTCAAGATTTCTACCAAATCAACTTAGCTGGAGCTAGTATTCACAAAGGTGGGCCAAGAGAGGCCTGGCATGATGCTCATGCTTGCATCACTGGTGAAGCTGCTTGGGATGTGTTGAAAAACTTTGAACAACGTTGGACTAAACAATGTGATCCTTCCTCGCTTGTCTCCGCAAGCACCATTCCTAATCTACTACACCGTTCCTATCCTCAGCATGTAGACCATCCTGTTGGAGATTGGAAAGTTCAGGTCTTTCGATCAATTGATCAGGTTTCTGCGAGCTCTTTGCCAGATAACATCTCTGTGGAACGCAGTATCCACGAAGCTTATGTACAAGCAATTCGGCGTGCAGAGAGGTTTATATATATTGAGAACCAATATTTCATTGGAGGTTGCCATATGTGGGAGAAGAATAGACACTGTGGCTGCAAGAACTTGATCCCATTGGAGATTGCACTCAAGGTGGTAAACAAGATTAAGGCGAGGGAGCGATTTTCTGTATATGTCGTGATACCAATGTGGCCAGAAGGGGTATCGGATAGTGAACCTGTTCAGGATATACTTCATTGGACAAGACAGACAATGTCAATGATGTATAGGTTGATCGGAGAGGCAATTCAAGACAGTGGTGAGTCGGTGCACCCCAGGGATTACTTGAATTTCTTCTGCCTTGCCAACCGGGAGGAGAAAGATAGAGGAGAGTTTGTTCCTCCTTATTCCCCCCAACATGAAACCCAGTACTGGAATGCCCAAAAGCATAGAAGATTCATGGTTTATGTCCACTCCAAGCTCATGATAGGTACGAGGATCGATCTCTGA 1164 0.4485 MLWDDETSLPIIKNKGVMRTHDEDAFEYFKHTKVVCRLCPRLHHMFPTLFAHHQKTITVDTQAQFLSTSDGDCINEYYRSSSREITSFIGGLDLCDGRYDTEEHSLFRTLNDESHAQDFYQINLAGASIHKGGPREAWHDAHACITGEAAWDVLKNFEQRWTKQCDPSSLVSASTIPNLLHRSYPQHVDHPVGDWKVQVFRSIDQVSASSLPDNISVERSIHEAYVQAIRRAERFIYIENQYFIGGCHMWEKNRHCGCKNLIPLEIALKVVNKIKARERFSVYVVIPMWPEGVSDSEPVQDILHWTRQTMSMMYRLIGEAIQDSGESVHPRDYLNFFCLANREEKDRGEFVPPYSPQHETQYWNAQKHRRFMVYVHSKLMIGTRIDL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01081 387 PANTHER PHOSPHOLIPASE D 1 381 IPR015679 -
Eupl10g01081 387 SUPERFAMILY Phospholipase D/nuclease 188 381 - -
Eupl10g01081 387 Gene3D Endonuclease Chain A 187 382 - -
Eupl10g01081 387 Gene3D Endonuclease Chain A 20 186 - -
Eupl10g01081 387 Pfam Phospholipase D Active site motif 49 98 IPR001736 GO:0003824
Eupl10g01081 387 SUPERFAMILY Phospholipase D/nuclease 16 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01081 Eupl-Chr10 30676280 30677443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01081 1 381 Phospholipase D Gene Family (Wang group) AT1G55180 63.542 3.32e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01081 K01115 - psom:113295213 632.869