Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01070 ATGGGCAGGAAATGCTCACATTGTGGGAACATGGGTCATAATTCAAGGACTTGCACTACTTACAGAGGGAGTGGTGTTAGTAAGCTAAGGCTATTTGGGGTGCAACTTGACATAGCTTCTTCTCTTCCCATGAAGAAGAGTTTTAGCATGGATTGCTTGTCACCCTCCTCATCAGCCTCTTCATCATCACCTTCTTCTTCGTCGAGTTCTCATGTTTCCCTTCGTGAGAATTCTGATAAAATGTCTAAGGGGTATCTCTCGGACGGTCTCGTCGGTAGAAGCCAAGAGAGGAAGAAGGGAGTCCCATGGACAGAGGAGGAGCACAAGACATTTCTAGTTGGGCTAGAGAAGCTTGGCAAAGGTGACTGGAGGGGTATCTCAAGGAACTTTGTAACTACAAAGACTCCAACCCAAGTTGCCAGTCATGCACAGAAGTATTTCCTTCGACAAGCAAGTCTCAACAAGAAGAAGCGCAGATCGAGCCTCTTCGACATGGTTGGAAACAGCAACATGGCTGGTCATCATGTTAACACTACAAATTCTAAGTCTAGTGATTCTTATTCCATCTCTTGTGGGTTGTTGCCTGTTTCTGCACCATCTCTTAATATAGCAATTGCCCAATGTGAAGTTCATCGAGAAACCACTCTGCCTTTGATAGACCTTAACTCATTAGAACAAGATACCCAGCCTGGAACTTCCACTGTAAGAAAACCTGTTGTTCTAAATGCGACACCCGATCTAGAACTCACACTTGCTGCACCGAGCTCATTCGATCAAAGTAAATCATCCCTGGGTTCCTTCTTAATTGGACAAATCAGAGTGATCTGA 828 0.4481 MGRKCSHCGNMGHNSRTCTTYRGSGVSKLRLFGVQLDIASSLPMKKSFSMDCLSPSSSASSSSPSSSSSSHVSLRENSDKMSKGYLSDGLVGRSQERKKGVPWTEEEHKTFLVGLEKLGKGDWRGISRNFVTTKTPTQVASHAQKYFLRQASLNKKKRRSSLFDMVGNSNMAGHHVNTTNSKSSDSYSISCGLLPVSAPSLNIAIAQCEVHRETTLPLIDLNSLEQDTQPGTSTVRKPVVLNATPDLELTLAAPSSFDQSKSSLGSFLIGQIRVI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01070 275 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Eupl10g01070 275 SUPERFAMILY Homeodomain-like 96 152 IPR009057 -
Eupl10g01070 275 SMART sant 99 149 IPR001005 -
Eupl10g01070 275 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Eupl10g01070 275 CDD SANT 102 147 IPR001005 -
Eupl10g01070 275 PANTHER TRANSCRIPTION FACTOR KUA1 3 197 - -
Eupl10g01070 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Eupl10g01070 275 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Eupl10g01070 275 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Eupl10g01070 275 FunFam transcription factor MYB1R1 101 152 - -
Eupl10g01070 275 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Eupl10g01070 275 Gene3D - 101 153 - -
Eupl10g01070 275 MobiDBLite consensus disorder prediction 53 75 - -
Eupl10g01070 275 MobiDBLite consensus disorder prediction 53 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01070 Eupl-Chr10 30593986 30596193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl10g01070 Myb_DNA-binding 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01070 - - nnu:104604397 343.969