Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01067 ATGATCCACCGCACTTCTTTAGTAACCCATGGTATAATGGAGAATCAATTTATATTCAATGCTTCACTAGACATTTCTGATCGAAATCATATGGCTATCGATGGGAGTGTGTCGCATATGTACTCAGGTTCACTTGCTCAGCCAGATTCACTGGATCTTAACAGCCATAGCCGGATAGTGGCTGGGTATCCTTTGCTTCCAACATTGCAAGGAGAACTGATAAATGATCCTCGGATTGTAAATCATGGTGGGATTATTGATCCAGAGTCATCCTTTTATGGGAATATGCCACTTGGTAAACAAGCAGCCAGATATGCTTCAGTCAATAGTTCCACTTGCAATGGTAACACTGGTTTTCGGGAGCATTTCTTCGGAGCATCCATGTCCGCTACTTCACTTGTTAACCTTTTGGCTACAAGTGACCTGCATGAAAATCTCAATGGATTGACAACTTCCACATCCTCAGGATTGCCATTAGAAGGTTTGAGAACTTTCATTTCAAATGCTTGTTGTAATACTTCAAATTCATTGCTCACAACCTCTGTGAACCGTGGATGTGATGGAATACAAGGTGGTATGGAGTATTTGGCAACCAAAAAAGATGCCAGTGTGACCAGCCAACTGGACGGTAAATGGAGCTTCGACAAATTTGTGGGTCCCCAGGAGCCCGCAGGAAATAACCCCATAAGAACAGTATGTCCACCCTACCATTTCATTGGAAGCTCAGACCCACCTGGGTGGATTTCAGTCGGCAAGTCTAACACGAGTGCAGATCATCCAGACAGCTACTGTGTACCCACTAATGAGCTGTCCCTAAGTCTCGTCACATGTAGGCCGTCTATTATCAATGTGCCAATTATCCCAGATCAGTGCTCAGAAATAAGTTCTCGTGTAACTCAGCATTCCTTACCGGAAGTTGTATCGGGAGTGGGGTTAGGTTCTGAACAAACCTCTAGCAACAGTAAGCCTTCTCTGGGATGTGGTTCACATAGACCCGTCCAGTTCTCCCATGCATTGTCTGGGTCGAAATATCTCCGTGAGGTCCAGCAAATACTTACTGAAGTTGCAAGCTATTCACTTGGAAATCTAGACCACCTGACTGGTTTGCCAGAAGGCACAGGGGTTGGGGCAAAGATATCATTTTCTTCTAGTTCCTTTGCTGAGAGGGGGATTTCGGTAACTGGGTCTGATGAATTTCCTTATTCTGCTAGAGAAACCAGATCCAAAGGTCAAATGCTCACATCGCCGAGACAGGGGGTTGAAGCCAAGAAAGCTCAACTTTTGGCTCTGTTACAAGTGGTTGATAGGAGATACAACCAATGCTTGGATGAATTCCATGCAGTCATATCTGCATTCCATGCTGCAACTGACCTGGACCCTCAGATACATGCTCGTTTCGCCCTTCAGACGATCTCTCTACTATATAAAAACCTGAGGGAGAGAATCTCCAATCAAATCCTAACAACTGGAGAATACCTCAGCAGCGGATGCACGAGAGAGGACAGATCGTTTGAATCTTCTTTCCTCCAAAAGCAATGGGCTCTGCAGCAGCTTAGGAGAAAAGATCATCAATTATGGAGACCACAAAGAGGCTTGCCAGAAAAATCTGTCTCAGTTCTACGGGCATGGATGTTTCAAAACTTCCTCCATCCGTATCCAAAGGATGCGGAGAAGCATTTACTTGCAATAAGAAGCGGATTGACAAGAAGCCAGGTATCAAATTGGTTTATAAATGCACGTGTTCGTCTCTGGAAACCAATGATAGAAGAAATGTACTCAGAGGTCAACAATAGAACATATCGACGAACTGAAGATGGAACTGACAGTGATCCTAGGAGCTACATAAGCATTGATGATCAGAGTTTCCAAAATAACTGA 1878 0.4425 MIHRTSLVTHGIMENQFIFNASLDISDRNHMAIDGSVSHMYSGSLAQPDSLDLNSHSRIVAGYPLLPTLQGELINDPRIVNHGGIIDPESSFYGNMPLGKQAARYASVNSSTCNGNTGFREHFFGASMSATSLVNLLATSDLHENLNGLTTSTSSGLPLEGLRTFISNACCNTSNSLLTTSVNRGCDGIQGGMEYLATKKDASVTSQLDGKWSFDKFVGPQEPAGNNPIRTVCPPYHFIGSSDPPGWISVGKSNTSADHPDSYCVPTNELSLSLVTCRPSIINVPIIPDQCSEISSRVTQHSLPEVVSGVGLGSEQTSSNSKPSLGCGSHRPVQFSHALSGSKYLREVQQILTEVASYSLGNLDHLTGLPEGTGVGAKISFSSSSFAERGISVTGSDEFPYSARETRSKGQMLTSPRQGVEAKKAQLLALLQVVDRRYNQCLDEFHAVISAFHAATDLDPQIHARFALQTISLLYKNLRERISNQILTTGEYLSSGCTREDRSFESSFLQKQWALQQLRRKDHQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDAEKHLLAIRSGLTRSQVSNWFINARVRLWKPMIEEMYSEVNNRTYRRTEDGTDSDPRSYISIDDQSFQNN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01067 625 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 273 602 - -
Eupl10g01067 625 SUPERFAMILY Homeodomain-like 527 595 IPR009057 -
Eupl10g01067 625 MobiDBLite consensus disorder prediction 601 625 - -
Eupl10g01067 625 Pfam Associated with HOX 339 483 IPR006563 -
Eupl10g01067 625 SMART prehox3 333 484 IPR006563 -
Eupl10g01067 625 CDD homeodomain 526 587 IPR001356 GO:0003677
Eupl10g01067 625 SMART HOX_1 526 590 IPR001356 GO:0003677
Eupl10g01067 625 Gene3D - 529 607 - -
Eupl10g01067 625 ProSiteProfiles 'Homeobox' domain profile. 523 586 IPR001356 GO:0003677
Eupl10g01067 625 Pfam Homeobox KN domain 543 582 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01067 Eupl-Chr10 30548393 30551034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01067 213 598 Homeobox Transcription Factor Family AT4G32980 49.612 5.02e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl10g01067 POX 6.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01067 - - tss:122653537 630.943