Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01062 ATGGGTAGGCGAAAGAGCAACAACAAGCAGAGCTCCTCGAGCAACAACAACAACAGTTTCAATCACCCAGAAGTGACGAAGATGAGCATCGAAGACGAAGAAGAGTTCGAAGAGACGACAGAGAGTTCCAACCTCGACAACTCCAGCTGCGAGCCCGAAGGAACCCTCGTTGGTGGCGACAAGACAAGTGCTGACTATTACTTCGATTCCTACTCTCACTTCGGTATTCATGAAGAAATGTTGAAAGATACAGTGAGGACGAAGACATATCAAAATGTTATTTACCACAATACCTTCCTCTTCAAGAACAAAGTGGTTCTTGATGTGGGAGCTGGGACTGGAATTTTGTCTCTCTTTTGTGCAAAAGCAGGGGCAAAGCATGTTTATGCGGTGGAGTGCTCCCAAATGGCTGACATGGCAAAAGAGATTGTCGAAGCAAATGGATTTTCTAATGTTATAACGGTTTTGAAGGGAAAGGTTGAAGAGATCGTACTTCCAGTCACCCATGTGGATATCATCATTTCAGAGTGGATGGGCTATTTTCTGTTGTTTGAGAATATGTTAAACACAGTCCTATATGCACGTGATAAGTGGCTTGTTGATGATGGAATTGTGCTACCAGACAAAGCTTCTCTCTATTTGACAGCCATCGAGGATGCCGAGTACAAAGATGATAAGATTGAATTCTGGAACAATGTTTATGGCTTTGACATGAGCTGCATCAAGAAGCAATCCATGATGGAGCCTCTTGTTGACACAGTTGACCAGAACCAGATTGTCACAAATTCCCAATTACTCAAGACGATGGACATCTCTAAGATGGCTCCTGGGGACGCTTCCTTCACAGCACCCTTTAAGCTTGTGGCAGAACGCAATGATTACATCCATGCTCTTGTTGCGTACTTTGATGTCTCATTTACAAAGTGCCATAAGTTGATGGGATTTTCTACAGGACCAAGATCACGGACCACGCATTGGAAACAAACAGTCCTGTACCTGGAAGATGTGCTAACCATATGTGAAGGAGAGGCAGTTGTTGGGAGCATGACTGTGGCACCCAACAAAAAGAACCCTCGTGATGTTGATATAATGCTCAAGTATTCGTTGAATGGTCAGCGTTGCCAGGTCTCAAGAACTCAACATTATAAGATGCGCTGA 1158 0.4404 MGRRKSNNKQSSSSNNNNSFNHPEVTKMSIEDEEEFEETTESSNLDNSSCEPEGTLVGGDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYHNTFLFKNKVVLDVGAGTGILSLFCAKAGAKHVYAVECSQMADMAKEIVEANGFSNVITVLKGKVEEIVLPVTHVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQSMMEPLVDTVDQNQIVTNSQLLKTMDISKMAPGDASFTAPFKLVAERNDYIHALVAYFDVSFTKCHKLMGFSTGPRSRTTHWKQTVLYLEDVLTICEGEAVVGSMTVAPNKKNPRDVDIMLKYSLNGQRCQVSRTQHYKMR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01062 385 Gene3D Vaccinia Virus protein VP39 55 207 IPR029063 -
Eupl10g01062 385 MobiDBLite consensus disorder prediction 1 54 - -
Eupl10g01062 385 FunFam probable protein arginine N-methyltransferase 1 55 207 - -
Eupl10g01062 385 FunFam Blast:Protein arginine N-methyltransferase 1 209 385 - -
Eupl10g01062 385 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 176 - -
Eupl10g01062 385 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 64 385 IPR025799 GO:0016274|GO:0018216
Eupl10g01062 385 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 22 374 IPR025799 GO:0016274|GO:0018216
Eupl10g01062 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 384 IPR029063 -
Eupl10g01062 385 Gene3D - 209 385 - -
Eupl10g01062 385 MobiDBLite consensus disorder prediction 1 25 - -
Eupl10g01062 385 CDD AdoMet_MTases 106 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01062 Eupl-Chr10 30500111 30509116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01062 67 348 C2H2 Transcription Factor Family AT3G12270 40.461 1.86e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01062 K11434 - ming:122087569 660.218