Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01015 ATGGGAATCTGCTCATCTGTTGCATCTTCAGAGATTGAAGAAACACAGGATAGCCATGAAAATGTGGTGTTCATTGACGAAACTGCGCGTTGTAAGGGATTTCCAAGACTTGCTTCTCTTCATTCTCAGCAAGGGAACAAAGCACAAAACCAAGATGCTGCCATCCTCTACCAGGGCTTTGGAAGGGAAGATAGAGTTTTTTGTGGAGTGTTTGATGGGCATGGTATGAATGGTCACATGGTGAGCCAAGCAGTGAGAAATCGCTTGCCGTCGCTGCTACTAGAACAGCGGACTGCACTTGCTTACGATGATTATGGTTATCACAATGACAAGTTTGATGTTGAATTGGTTTCAACCAATACGTTTGATGAATGGAGAAGGGCTTGTGTCAGTTCTTTCAAGGTGATGGACAAGGAACTCAAGCTTCAGAACTTCGATTGTTCTTGCAGTGGAACCACTGCAGTAACCATCATAAAGCAGCAGGGTGAGGATCTTGTTATTGCTAATCTTGGCGACTCAAGGGCAGTTTTGGGAACCATTTCTCACAATGATGAACTGATGGCTGTTCAGCTAACAACTGATTTAAAGCCTAACTTACCCAATGAAGCGGAACGAATAAGGAAGAGCAACGGTCGGATATTTGCGCTTAAGGACGAACCACACGTTCAGCGTGTGTGGTTGCCCAATGATGACTTCCCAGGCCTTGCCATGACACGAGCTTTCGGAGACTTCCAGCTCAAGATTTATGGCATAATTGCAATCCCTCAGATATCCTACTGTCGCCTAACCAACAAAGACCAGTTTCTTGTTCTTGCAACAGATGGGGTGTGGGATGTGCTTAGTAACGACCAAGTCGCATCAATTGTTTGGTCTGCGGAGAGCGAGGAGGCAGCGGCACAAGCAGTTGTTGATGCAGCAGTTGCTGCATGGAGAAGCACGTTCCCTTCTTTAAGGTGGGATGACTGCACCGTTGTTTGCATTTTCTTGCAGGAGAGGAGGCAACAACACCACCTCTTGCCCAAAGAGAGCTGA 1032 0.4651 MGICSSVASSEIEETQDSHENVVFIDETARCKGFPRLASLHSQQGNKAQNQDAAILYQGFGREDRVFCGVFDGHGMNGHMVSQAVRNRLPSLLLEQRTALAYDDYGYHNDKFDVELVSTNTFDEWRRACVSSFKVMDKELKLQNFDCSCSGTTAVTIIKQQGEDLVIANLGDSRAVLGTISHNDELMAVQLTTDLKPNLPNEAERIRKSNGRIFALKDEPHVQRVWLPNDDFPGLAMTRAFGDFQLKIYGIIAIPQISYCRLTNKDQFLVLATDGVWDVLSNDQVASIVWSAESEEAAAQAVVDAAVAAWRSTFPSLRWDDCTVVCIFLQERRQQHHLLPKES* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01015 343 CDD PP2Cc 36 290 IPR001932 -
Eupl10g01015 343 ProSiteProfiles PPM-type phosphatase domain profile. 37 329 IPR001932 -
Eupl10g01015 343 Gene3D - 32 332 IPR036457 -
Eupl10g01015 343 PANTHER PROTEIN PHOSPHATASE 39 327 IPR015655 GO:0004722|GO:0006470
Eupl10g01015 343 Pfam Protein phosphatase 2C 40 308 IPR001932 -
Eupl10g01015 343 SMART PP2C_4 27 327 IPR001932 -
Eupl10g01015 343 SUPERFAMILY PP2C-like 33 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01015 Eupl-Chr10 29924004 29926558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01015 1 334 PP2C-type Phosphatase Gene Family AT5G26010 51.320 2.42e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01015 - - ming:122068852 431.795