Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01004 ATGCTAATTAAGGATTTCTATAAACCTTACAGGCAGCACGAACGAAAGCAAGAGCAAGAAATTGCAGAGTGCGATGGCCAAGCACACATGTACATGTTTCGACACTCCCTACAGGGTAAGGTTCATGGATCTCTGGCTCGGGCCGGGAAGGTGAGAGGCCAAACCCCAAAGGTCGCGAAGCAGGACAAGAAGAAGAAACCCAGAGGAAGGGCTCACAAGAGGATGCAATACAACAGGCGCTTCGTCACAGCCGTTGTTGGATTTGGGAAGAAGAGGGGACCCAACTCGTCTGAGAAGCAACTGCGTTTGCAGATAGTTATAATAGGAAACTATTGTACGTTAAGGACTTGA 351 0.4843 MLIKDFYKPYRQHERKQEQEIAECDGQAHMYMFRHSLQGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEKQLRLQIVIIGNYCTLRT* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01004 116 Pfam Ribosomal protein S30 40 96 IPR006846 GO:0003735|GO:0005840|GO:0006412
Eupl10g01004 116 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 15 100 - -
Eupl10g01004 116 MobiDBLite consensus disorder prediction 43 76 - -
Eupl10g01004 116 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01004 Eupl-Chr10 29814844 29826972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01004 39 99 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.721 2.40e-29 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01004 K02983 - qsa:O6P43_007833 121.324