Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00993 ATGCAGATGTTATCGGGTTTCTTCTTTGCATTGTTGGGTTGCTTACCACTGGTTCATGGGCACGAGCAAACAGGTTTCATAAGCATCGACTGTGGGAATCATGAAGATTTCAGCTATACAGACATAGAAACTCATATAAATTACGTATCTGATAAACTATATATAGACACAGGAGAAAACATGAACATTTCCTCAGATTTCAAGTCTGAAACTCTTCAAAAGCCATTCTTGAATGTCAGAAGCTTTCCTGGAGAAAGAAAGAATTGTTACACCTTAAAACCTGAAGGTGGTAAGGCTAAAAAGTATTTGATCAGAGCTTCTTTCATGTATGGGAATTACGACGGTATGAATCGACTGCCGAAATTTGATCTATATCTTGGAGTTAATCTCTGGAATTCAGTGCAATTGGACAATGCATCTCATGTTCAAATGGAAGAGATCATACATATAGCTTCCATGGATTATATACATGTTTGCCTCATGAACAAGGACCTTGGAACACCTTTCATATCAGCATTGGAGCTAAGGCCTTTAAGTGATTCTATATATGTAGCTAAAAAGTCTGGATCATTAGCACTATTCAGGCGGTTTGACGTCGGATCAACAACTAATAAGAATATCAGGTTTGTGGACGATGAGTATGATCGAATCTGGTCTCCCTATCCTGGGCCATGGGATCCTTTCAGCACTCCACTTGAAGTTAATGATCCACGTAGATATAAGGTGCCATCAACAGTCATGAATACCGCAGCCAGGCCAAGGAATGGTACAGATTCTATCATAATCGAGTTACAACCAGCTGATCCCACTTCAGAATTTTATGTCTTCATGCACGTTGCCGATCTTGAGTTGCTCCAGAGTAACCAGTTGAGGAAATTCAACATCTCTGTGAATGGTCGTCTTTTCTCGGATGAACCTGTGCTTCCAGAATACCTGTCCACAACAACTGTGTCTTCCACTGAACTCTTCACTGGAGATACAATTGTGATTACTATTTCAAAGACGACGGATTGTACTCTTCCACCTATACTCAATGCCCTCGAGATTTATGTCCTCAAAGAGATCGCAGAGTCACCAACAAACAGTGACGATGTTGATGCTATCATGAACATCAAAAAAATATATGGAGTGACAAAACACTGGGTGGGTGATCCATGTACTCCGAGGAATTTCTCTTGGGAAGGTCTGAATTGCATTTACGACGGTAACAGTCCCCCAAGGATCATCTCTTTAGACTTGGCCTCCAGTGGATTGTCTGGAGAAATAGCTGCTTGTCTAGCCAATCTATCATCCATTCAGTCCTTGGATTTATCGAGAAATAACTTAGAAGGTCCAGTGCCTGATTTTCTAGCAAAACTACCGAACTTGACGATCCTGAATTTAACAGGAAACCAACTGACGGGATCGATTCCTATGGTTCTTATTGAAAAATCAATAAATGGGTTACTGTTGAGTGTGGGGGGCAATCCAAATCTTTGTCCATCTGTTTCATGTAAAAAGAGCAAGAAGATTATTATTCCAGTACTTGCATCAATTTCCTCAGCCATGGTCCTCTTAATGGCATTACTTATCTTGTGGAGCTTAAAAAGGAGAAGACAAAAAGAGCCAGCTGTTGATGCCAGTGATAACAAAGAGGCCTTGGAATCAAAGAATCGACTGTTTACTTATGCTGAGGTTGTCAGTATTACCAACGATTTTCGAAGGGTCATAGGAAGAGGAGGATCTGGGACTGTTTACCATGGATACTTGAAAGATAACACTCAAGTTGCAGTCAAGATGCTCTCTTCATCCACAATTCAGGGGTCTGAGGAAGTTCAGACTGAGGCTAAACTATTGATGGGAGTTCACCATAGGAACCTGGCTTCTTTCATTGGCTACTGTAATGAAGGAAACAACATGGCACTCATCTATGAGTACATGGCTAATGGAAACTTACAAGAGTATCTTACAGATCAAAATGCAAATGTCCTAAGTTGGGAAGAGAGACTCAGAATAGCAGTGGATGCTGCACAAGGATTGGAGTATTTGCATAATGGTTGCAAGAAACCCATAGTTCATAGAGATGTGAAGACGGCGAACATCCTTTTGGATGAAAGATTGCAAGCTACAGTAGCGGATTTTGGATGCTGCAAAGTTTTCCCTGATGAAGGTGACACTCATGTGTCAACTAAAGTCATTGGCACAACAGGGTACCTTGATCCTGAGTATCATCTTACAAACAGGTTGAATGAGAAAAGTGATGTTTATAGCTTTGGGATTGTTCTATTAGAGCTAATAACAGGTCAACCAGCGATAATAAAAGGCTCTGAGTGTATTCATATAGTTAAATGGGTAAATCCCATGCTTGCAAGAGGACAAATAAGAAATATTGTTGATCCAAGATTACAAGGAGATTTCGATGTCAATTCTACTTGGAAAGCTATAGAGATAGCAATGGCATGCACACCATCCATTTCCATCCAAAGGCCAACAATGAGTCGTGTATTAATGGAATTAAAGGAGTGTTTGGCAATAGAGACAGCTCGCAAAACAATTTCAAGGGCGAAAGACGACAAAGCGACAAAATTAGGCAATTCATTGGTAATGCTTCCTATGGATTATGAAATTGAAATAGGTCCCTCTGCAAGGTAG 2631 0.4044 MQMLSGFFFALLGCLPLVHGHEQTGFISIDCGNHEDFSYTDIETHINYVSDKLYIDTGENMNISSDFKSETLQKPFLNVRSFPGERKNCYTLKPEGGKAKKYLIRASFMYGNYDGMNRLPKFDLYLGVNLWNSVQLDNASHVQMEEIIHIASMDYIHVCLMNKDLGTPFISALELRPLSDSIYVAKKSGSLALFRRFDVGSTTNKNIRFVDDEYDRIWSPYPGPWDPFSTPLEVNDPRRYKVPSTVMNTAARPRNGTDSIIIELQPADPTSEFYVFMHVADLELLQSNQLRKFNISVNGRLFSDEPVLPEYLSTTTVSSTELFTGDTIVITISKTTDCTLPPILNALEIYVLKEIAESPTNSDDVDAIMNIKKIYGVTKHWVGDPCTPRNFSWEGLNCIYDGNSPPRIISLDLASSGLSGEIAACLANLSSIQSLDLSRNNLEGPVPDFLAKLPNLTILNLTGNQLTGSIPMVLIEKSINGLLLSVGGNPNLCPSVSCKKSKKIIIPVLASISSAMVLLMALLILWSLKRRRQKEPAVDASDNKEALESKNRLFTYAEVVSITNDFRRVIGRGGSGTVYHGYLKDNTQVAVKMLSSSTIQGSEEVQTEAKLLMGVHHRNLASFIGYCNEGNNMALIYEYMANGNLQEYLTDQNANVLSWEERLRIAVDAAQGLEYLHNGCKKPIVHRDVKTANILLDERLQATVADFGCCKVFPDEGDTHVSTKVIGTTGYLDPEYHLTNRLNEKSDVYSFGIVLLELITGQPAIIKGSECIHIVKWVNPMLARGQIRNIVDPRLQGDFDVNSTWKAIEIAMACTPSISIQRPTMSRVLMELKECLAIETARKTISRAKDDKATKLGNSLVMLPMDYEIEIGPSAR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00993 876 FunFam Leucine-rich repeat receptor-like kinase 363 495 - -
Eupl10g00993 876 SMART serkin_6 564 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00993 876 Gene3D Ribonuclease Inhibitor 366 482 IPR032675 -
Eupl10g00993 876 SUPERFAMILY Protein kinase-like (PK-like) 549 832 IPR011009 -
Eupl10g00993 876 Pfam Malectin-like domain 29 350 IPR024788 -
Eupl10g00993 876 Gene3D Phosphorylase Kinase; domain 1 537 639 - -
Eupl10g00993 876 Pfam Protein tyrosine and serine/threonine kinase 566 830 IPR001245 GO:0004672|GO:0006468
Eupl10g00993 876 Gene3D Transferase(Phosphotransferase) domain 1 640 858 - -
Eupl10g00993 876 FunFam Leucine-rich repeat receptor-like protein kinase 542 639 - -
Eupl10g00993 876 PANTHER OS07G0107800 PROTEIN-RELATED 27 836 - -
Eupl10g00993 876 CDD STKc_IRAK 570 834 - -
Eupl10g00993 876 Pfam Leucine rich repeat 410 466 IPR001611 GO:0005515
Eupl10g00993 876 ProSiteProfiles Protein kinase domain profile. 564 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00993 876 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 640 845 - -
Eupl10g00993 876 SUPERFAMILY L domain-like 388 474 - -
Eupl10g00993 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 684 696 IPR008271 GO:0004672|GO:0006468
Eupl10g00993 876 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00993 Eupl-Chr10 29675724 29684269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00993 8 837 Receptor kinase-like Gene Family AT2G19210 49.112 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl10g00993 Malectin_like 3.7e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00993 - - nnu:104588225 1008.44