Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00992 ATGGGGAGAGCTCCTTGTTGCGACAAAGCTAACGTGAAAAGAGGACCATGGTCCCCTGAAGAAGACACAGCTCTCAAGAACTACGTTGAGAGAAACGGCACTGGTGGAAATTGGATTGCTTTACCACAGAAAGCAGGCCTTAATCGTTGCGGCAAGAGCTGTCGTTTGAGATGGCTTAATTATCTAAGACCAGACATCAAACATGGAGGTTTTACTGAGGAAGAAGATAACGTTATTTGTACCCTCTACAAAAACATAGGGAGCAGGTGGTCTGTCATAGCTTCACAACTGCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACCAAGTTGAAGAAAAAGTTATTGGCTGGAAAGACCAGTCTCACTAGCAGCAACAACAACAACATCACTACTAACAACCATATTCAGCTTGGTTCTTCACCTTCTCCTGCTATGCTAATTAAATCCGAAACCTATAATTACGGTTTCTCGACTTGTCTGGATCAGAATTCGACAACATTGCAATCGTCCATGGATGTTGGGTTCGCACAAGATGTCGATTCTCATAGACTGGTTTCAAACCCAATTCATTTTCCTCTGCCAGGACTCATGGAAGCGTCCGAATTGGGCATAAGTGCAAACAACAATAGTTACAGTGTTTCATCTCAGGAGGTTTCAAGCCTTTCAATTTCATCTTCTCTTGCTTTGGACAACAATTATGTCTCATGGTCTGGTAATGGAGGTGGTGAAGATGATGGGTTCTTGATGGATTACGGATACGGTTATTCGTATGATCTTCTCAATGGTTTTGGTTTTCAGGAGAAATCCAGTGAAGCTGCTTCAAATTTAGCTTACTCTCCTTATGCCAATTTCTTGGCTAACACTACTTCTGACACAAAACCACAAGGCCTGCATCAAAGTATTACAAACTAA 921 0.4213 MGRAPCCDKANVKRGPWSPEEDTALKNYVERNGTGGNWIALPQKAGLNRCGKSCRLRWLNYLRPDIKHGGFTEEEDNVICTLYKNIGSRWSVIASQLPGRTDNDVKNYWNTKLKKKLLAGKTSLTSSNNNNITTNNHIQLGSSPSPAMLIKSETYNYGFSTCLDQNSTTLQSSMDVGFAQDVDSHRLVSNPIHFPLPGLMEASELGISANNNSYSVSSQEVSSLSISSSLALDNNYVSWSGNGGGEDDGFLMDYGYGYSYDLLNGFGFQEKSSEAASNLAYSPYANFLANTTSDTKPQGLHQSITN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00992 306 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Eupl10g00992 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Eupl10g00992 306 Gene3D - 69 139 - -
Eupl10g00992 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Eupl10g00992 306 FunFam Transcription factor RAX3 7 68 - -
Eupl10g00992 306 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Eupl10g00992 306 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Eupl10g00992 306 CDD SANT 71 111 IPR001005 -
Eupl10g00992 306 FunFam Transcription factor RAX3 70 136 - -
Eupl10g00992 306 CDD SANT 16 62 IPR001005 -
Eupl10g00992 306 PANTHER OS09G0431300 PROTEIN 1 227 - -
Eupl10g00992 306 SMART sant 13 64 IPR001005 -
Eupl10g00992 306 SMART sant 67 115 IPR001005 -
Eupl10g00992 306 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Eupl10g00992 306 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Eupl10g00992 306 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00992 Eupl-Chr10 29665537 29667542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00992 1 118 MYB Transcription Factor Family AT5G65790 83.898 5.13e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g00992 Myb_DNA-binding 7.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00992 K09422 - nnu:104604454 381.719