Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00966 ATGGGAATTGTGTTTGACATAAAATACTATGCAGTAGAAGGAGCAGGAGCTGATAAAACAGTAGTCCAATGGGGAGACACAGCTCAAACAATTGGGTCAAGAGGGCAGCCTATTGGGACCTATAATTCTGCAACTTTTGCTGTGAATTCCCCCTATTTCATAGCCAAGAACATCACTTTTAAGAACACAACTCCTCTTCCACCACCAGGAGCTGTTGGAAAGCAAGCAGTGGCATTTAGAATATCAGCAGATACAGCAGCCTTCTTGGGTTGTAGATTCTTGGGTGCTCAGGATACACTGTATGATCATCTGGGTAGACATTATTACAAAGATTGCTATATTGAAGGCTCTGTGGATTTCATTTTTGGAAATGGGCTCTCACTATATGAGGGATGTCATGTGCATGCAATAGCTGAGAACTATGGGGCCCTCACAGCCCAAGGCAGATCGGGCCCTCTAGATGACACAGGCTTCTCATTTGTGAACTGTAGGGTCACGGGGTCAGGAGCTCTCTACCTTGGAAGGGCATGGGGACCCTTCTCTAGGGTTGTCTTCGCCTACACATATATGGACGACATTATCATCCCCAAAGGCTGGTACAACTGGGGAGACCCTAGTAGGGAAATGACGGTGTTTTATGGACAATACAAATGTAGTGGTCCTGGAGCAAGCTTTGCAGGAAGAGTTTCATGGTCAAGAGAATTAACTGACGAGGAGGCCAAGCCTTTTCTTTCATTGAGCTTCATTGATGGGCCAGAGTGGATTAAATTGTAA 774 0.4548 MGIVFDIKYYAVEGAGADKTVVQWGDTAQTIGSRGQPIGTYNSATFAVNSPYFIAKNITFKNTTPLPPPGAVGKQAVAFRISADTAAFLGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLYEGCHVHAIAENYGALTAQGRSGPLDDTGFSFVNCRVTGSGALYLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPSREMTVFYGQYKCSGPGASFAGRVSWSRELTDEEAKPFLSLSFIDGPEWIKL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00966 257 ProSitePatterns Pectinesterase signature 2. 114 123 IPR033131 -
Eupl10g00966 257 SUPERFAMILY Pectin lyase-like 12 256 IPR011050 -
Eupl10g00966 257 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 256 - -
Eupl10g00966 257 Pfam Pectinesterase 13 251 IPR000070 GO:0030599|GO:0042545
Eupl10g00966 257 Gene3D - 3 257 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00966 Eupl-Chr10 29310059 29314278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00966 9 255 Carbohydrate Esterase AT5G47500 52.823 1.74e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00966 K01051 - rcu:8265139 484.182