Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00962 ATGTCGAAAATACCCTCAAATTCCTCCGAAATCCCTCTCTCCCTCCTTCTTCTTCTCCTCATCTCCATACCCTTCCAAGGAAACTCCCAGACCGAGAACGAAGAACAGACGATCCTACTGAAACTCAAGCAACAATGGGGAACTCCATCGTCGATCAAGTCCTGGGACCCATCAAGTGGGCTCCACTGCAACTGGAAAGGGATCGTCTGCGTTAATGGTTCCGTCACCAAAATCTTACTTCGCGACATGAACATCACCGAAAAAATCCCACCGTCCATCTGCAACCTCGAAAGCCTTACCGAGATCGATCTCTCTTACAACTACATCCCTGGAGAATTCCCAACTGTTCTCTACAACTGTTCGAAGCTCGAAACCCTTGATCTCTCTCAGAACTACTTCGTCGGCCGGATTCCAGCTGATATCAATCGAATTTCTAGTCTCCGGCTACTCAATCTTGGCGCGAACAACTTCTCCGGCGACATTCCTGCGTCTTTAGGCCGTTTTACGGCGTTACAGTCGCTCCAGCTTTTCCAGAATCTGTTTAACGGCTCGTTCCCGCCAGAACTCGGTAACCTATCGAAGCTCGAAGTTCTTCAATTGGCTTTCAATCAATTTGTGCCAGCGAGGATTCCATCGGATTTCGGTCGGTTGAAGAAATTGCGGTATTTATGGATGGAGGGTTCGAATTTGATCGGAGAAATTCCGGAAGCGATCGGTGATATGGTCGATCTCGAACATTTGGATCTTTCGTCGAATGATTTGAGCGGGAAAATCCCTAGCAATTTGTTTCTGTTGAAGAATTTAACCGGTTTGTATCTTTCTGATAACAGATTGTCTGGAGAGATCCCTAAGCCGATCGAAACTTTCTATTTGAACGAAATTGATCTTTCAATGAACGAGCTGACCGGAACGATACCGGATGATTTCGGTAGTTTACAGTATTTGAGCCATTTGGATATGTATGCTAATCGATTAACCGGAGAAATACCGGCGAGTATTGGCCGGATTCCGTCGCTGACAGGTATTCGGCTGTTTAGGAACAACTTGACTGGCGTTTTGCCCCCAGAATTAGGCAATTATTCGAGGCTTGAAGCTATCGAAGTCTCAGAGAACCAGCTTACCGGCAATTTGCCGGAGAATTTATGTGCTCGCGGCGTGTTGGTTGGAGTGGTGGCTTTCTCTAACAATCTCAGCGGAGACTTGCCGAGATCGTTCGTGAATTGCAATAGTTTGTTTATGATTCAACTTTACAAAAATAGATTTTCTGGTGTGATTCCTGTTGGATTCTGGTCATTGAGGAATTTGTCGACCATAATAATAAGCGACAATTTGTTTTCTGGAGAGCTTCCTGCTAAATTGGCGTCGAATTTATCGCGACTGGATATTGGTAACAACAGGTTTTATGGCAAAATTCCTTCTGAAATCTCAGCGTCCATGAATCTCATAGTCTTCAAGGCGAGCAACAACCTCTTTTCTGGCGAGATTCCTTTAGAATTAACGGCTCTCTCTAGCCTTCAAACTCTCTCCCTTGATGGTAATCGACTTTCTGGTCCAATTCCATTGGAGATAATCTCGTGGAGGTCTCTGGTGTCTCTAAATCTCAGTAGAAATCAGCTCTCTGGTGAAATTCCGCCTGTGATCGGCTTACTCCCTGACCTCAATGAGCTTGACCTGTCGGAAAACCAATTTTCGGGTGTAATTCCACCTGAAATTGGCAAACTGAAGCTCACCTTCCTCAACCTCTCTTCAAACCAACTCAACGGGAAAATTCCAGCTGACTTCGAAAACTTGGCGTTCGATAGCAGCTTCTTGAACAACACTGGCCTTTGCGCAGGTAACCCCCTCCTAAACCTCGGTTCCTGCATTTCTGAATCGCGGGACTCCAGCAAAATGTCATCTCCACTTCGCACCGTGATTTTAATCCTCGCCGGAGCTATTTTTCTCGTTGCTGTGTTATTTGCCTTGTTCATGATCAGAGATTTCAGGAGGAGAAAGCATGGAAGAGATCTTGCCTCATGGAAGTTGACCTCATTCCAGAGGTTGGACTTCACAGAGTCAAACATTTTGTCTAGTATGACCGAGAACAATCTAATTGGGAGTGGTGGATCAGGGGAGGTTTACCGCATTGCGATTAATCGTTCAGGCGACTATGTTGCCGTTAAAAAGATCTGGAATAAAGGGATGTTAGATCAGAAGCTCAAGAAGGAATTTGAAACAGAGGTTCAGATCTTGGGTACAATTCGGCATTCCAACATTGTGAAATTGCTGTGCTGTATTTCAAATGAGGACTCGAAGCTACTTGTTTATGAATACATGAAGAACCATAGCTTGGATCAATGGCTCCATGGGAAGAAAAGAGAATCATCGATCTCTCGATCAGTCCATCGAACCATCTTGGATTGGCCCACGAGGTTGCAGATTGCAGTCGGAGCTGCACAAGGGCTTTGCTACATGCATCACGGCTGCTCTCCACCGATCATTCATCGTGACGTAAAGTCGAGCAATATCCTTTTGGATACCGAGTTCAAGGCAAGGATTGCAGATTTTGGGCTAGCCAAGATGTTGGTTAAGCATGGAGAGCCAATGTCCGCTGTCGCAGGCTCATTCGGGTACATTGCTCCAGAGTACGCTTATACAACCAAAGTGAACGAGAAGATCGATGTTTATAGCTTTGGGGTAGTACTCTTGGAACTGGCAACTGGAAGGGAAGCCAACGACGGAGACGAACATACATGTCTTGCCGAATGGGCATGGCGTCACTTCCAAGAGGGAAACCCTATTGACGATGCCCTCGACGAGGAGGTCAAGGAACCATATTACTTAAAGGAAATGATTATGGTTTTCAAATTGGGGCTCATTTCTACTGGCACATTACCTTCGACCAGGCCTTCCATGAAGGAGGTATTGCAAATCCTACTCCAATGTGGCCCTTGGCAAGCACATGGAGAGAAGGCAGCTCTGACCGAGTACGATGTTACTCCCCTCCTCAATGCTACAACTAAATACCTTTCCAGCTACAGGACTATTCAGCCGAAAACAAGCTCGGTTGCTGCTGAAGATAGTTTTACAAGTAATGTATGA 3081 0.458 MSKIPSNSSEIPLSLLLLLLISIPFQGNSQTENEEQTILLKLKQQWGTPSSIKSWDPSSGLHCNWKGIVCVNGSVTKILLRDMNITEKIPPSICNLESLTEIDLSYNYIPGEFPTVLYNCSKLETLDLSQNYFVGRIPADINRISSLRLLNLGANNFSGDIPASLGRFTALQSLQLFQNLFNGSFPPELGNLSKLEVLQLAFNQFVPARIPSDFGRLKKLRYLWMEGSNLIGEIPEAIGDMVDLEHLDLSSNDLSGKIPSNLFLLKNLTGLYLSDNRLSGEIPKPIETFYLNEIDLSMNELTGTIPDDFGSLQYLSHLDMYANRLTGEIPASIGRIPSLTGIRLFRNNLTGVLPPELGNYSRLEAIEVSENQLTGNLPENLCARGVLVGVVAFSNNLSGDLPRSFVNCNSLFMIQLYKNRFSGVIPVGFWSLRNLSTIIISDNLFSGELPAKLASNLSRLDIGNNRFYGKIPSEISASMNLIVFKASNNLFSGEIPLELTALSSLQTLSLDGNRLSGPIPLEIISWRSLVSLNLSRNQLSGEIPPVIGLLPDLNELDLSENQFSGVIPPEIGKLKLTFLNLSSNQLNGKIPADFENLAFDSSFLNNTGLCAGNPLLNLGSCISESRDSSKMSSPLRTVILILAGAIFLVAVLFALFMIRDFRRRKHGRDLASWKLTSFQRLDFTESNILSSMTENNLIGSGGSGEVYRIAINRSGDYVAVKKIWNKGMLDQKLKKEFETEVQILGTIRHSNIVKLLCCISNEDSKLLVYEYMKNHSLDQWLHGKKRESSISRSVHRTILDWPTRLQIAVGAAQGLCYMHHGCSPPIIHRDVKSSNILLDTEFKARIADFGLAKMLVKHGEPMSAVAGSFGYIAPEYAYTTKVNEKIDVYSFGVVLLELATGREANDGDEHTCLAEWAWRHFQEGNPIDDALDEEVKEPYYLKEMIMVFKLGLISTGTLPSTRPSMKEVLQILLQCGPWQAHGEKAALTEYDVTPLLNATTKYLSSYRTIQPKTSSVAAEDSFTSNV* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00962 1026 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 209 967 - -
Eupl10g00962 1026 SMART LRR_typ_2 96 120 IPR003591 -
Eupl10g00962 1026 SMART LRR_typ_2 241 265 IPR003591 -
Eupl10g00962 1026 SMART LRR_typ_2 550 574 IPR003591 -
Eupl10g00962 1026 SMART LRR_typ_2 192 217 IPR003591 -
Eupl10g00962 1026 SMART LRR_typ_2 502 526 IPR003591 -
Eupl10g00962 1026 SUPERFAMILY Protein kinase-like (PK-like) 687 973 IPR011009 -
Eupl10g00962 1026 SUPERFAMILY L domain-like 291 597 - -
Eupl10g00962 1026 FunFam Receptor-like protein kinase HSL1 672 771 - -
Eupl10g00962 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Eupl10g00962 1026 FunFam Receptor-like protein kinase HSL1 isoform A 32 183 - -
Eupl10g00962 1026 FunFam Kinase family with leucine-rich repeat domain-containing protein 772 989 - -
Eupl10g00962 1026 ProSitePatterns Protein kinases ATP-binding region signature. 698 722 IPR017441 GO:0005524
Eupl10g00962 1026 ProSiteProfiles Protein kinase domain profile. 692 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00962 1026 Gene3D Phosphorylase Kinase; domain 1 675 771 - -
Eupl10g00962 1026 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Eupl10g00962 1026 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Eupl10g00962 1026 Pfam Leucine Rich Repeat 244 261 IPR001611 GO:0005515
Eupl10g00962 1026 Gene3D Ribonuclease Inhibitor 183 288 IPR032675 -
Eupl10g00962 1026 Gene3D Ribonuclease Inhibitor 496 617 IPR032675 -
Eupl10g00962 1026 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Eupl10g00962 1026 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 188 285 - -
Eupl10g00962 1026 Gene3D Transferase(Phosphotransferase) domain 1 772 987 - -
Eupl10g00962 1026 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 286 381 - -
Eupl10g00962 1026 ProSiteProfiles Leucine-rich repeat profile. 243 265 IPR001611 GO:0005515
Eupl10g00962 1026 SUPERFAMILY L domain-like 44 378 - -
Eupl10g00962 1026 Pfam Protein kinase domain 694 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00962 1026 SMART serkin_6 692 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00962 1026 ProSiteProfiles Leucine-rich repeat profile. 528 550 IPR001611 GO:0005515
Eupl10g00962 1026 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 386 625 - -
Eupl10g00962 1026 Gene3D Ribonuclease Inhibitor 385 495 IPR032675 -
Eupl10g00962 1026 Gene3D Ribonuclease Inhibitor 289 384 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00962 Eupl-Chr10 29233665 29237274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00962 22 1007 Receptor kinase-like Gene Family AT5G25930 55.948 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl10g00962 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00962 - - nnu:104604480 1313.52