Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00946 ATGCGTGTGTCATCTATTCATCTCCGTCCACGTGTCGCCAGCTCCGCTGTCACTTCTCTCCTTTTATTCCAACTTCGCTCTTTAGCCTGCTTTCCCTCTTTCTCCCTCTCTCTTTCTCCGGCATGTCGACCTGTTTTTGTCCCAGCTTCCTCACACGGTGACACCTCTCTTTCTTTCTCTGAAAACATTGGTGAATGTAAGGTTTGGACGGCACAGATGGATTTATTAGACGACGAAGATCTTCGCCAAGCTGGATCTCTCCAAGAATCCGACATGGCATCGATGGATTCCAACGCATCTTCCCTGTTTGGAACTGAGGACATCCGAACCAGCTCATGCGACATCTCCGTCAGCAGCTCTGGTGAGGTCCCTGCCGAGGTGGTTGCAAACATGGTGGTACCAAAGGTGGTGGACCCCATCCCTTCAGGTAACGGTGACGGTAACGAAGGAAGAGTAACGGAAATGAGTGTGACAGTGACGGCTAGGGAGAAGTGCGTGGGGAGAAATAATAAGGGGGTGACCTGGGGGTTCGCTTCGATCGTTGGGAGACGGAGAGAGATGGAGGATGCTGTCGCCGTTATACCTAGCTTCATGTCTCACACGTGCGATCACATAGGCGGTTGTACGGCTCCGAGTTCCAAAAGCTCCGGAGAGATCTCGCCCGTCCATTTCTTCGGTGTCTACGATGGTCATGGAGGCTCTCAGGTGGCTAAATTTTGCGCAGAACGGATCCATGAAGTGGTTGCAGAGGAGTGGGAGAGGGGAGCAGGTGGAGGAGATGGATGGCATAGGAGGTGGGAGGCGGCATTTTGTAGTGGATTTGCGCGGGCTGACAATGAGGTCATAGAGGAGGCAATAGCACCAGAAATAATTGGGTCAACTGCTTTGGTGGCGGCGGTATCAGGGTGTCAGATCATTCTGTCCAATTGTGGTGACTCAAGGGCAGTGCTTTATCGAGGGACTCAAACAATCCCTTTAACAGTTGATCACAAGCCTGACAGAGAAGATGAGCTGATGAGGATTGAAAGACTAGGAGGAAGAGTCATAAACTGGAATGGTGCTAGGGTGTATGGAGTTCTCGCAATGTCCAGAGCTATAGGAGATCGGTATTTGAGTCCATGGATTATTCCAGTGCCTGAAGTTACTTTCATGACGAGGAGTGAAGAAGATGAGTGTTTGATATTGGCAAGTGATGGACTTTGGGATGTGTTGTCCAATAATGAGGTAGGGGAGGTGGCTTGCCACCTCCTGAGACGGCGTCAGCAGTCCCCAACAGCTGATGAGACATCACCACCTCTGGCACAAGCCATTGCCGATCATCTCACTGATCTAGCTTACAGGAAGAACAGCACTGACAACATCTCAGTCATTGTTGTCATTCTGAAATCCAAGAGAAAGCGTAGGCGGAGGCAATGA 1416 0.5071 MRVSSIHLRPRVASSAVTSLLLFQLRSLACFPSFSLSLSPACRPVFVPASSHGDTSLSFSENIGECKVWTAQMDLLDDEDLRQAGSLQESDMASMDSNASSLFGTEDIRTSSCDISVSSSGEVPAEVVANMVVPKVVDPIPSGNGDGNEGRVTEMSVTVTAREKCVGRNNKGVTWGFASIVGRRREMEDAVAVIPSFMSHTCDHIGGCTAPSSKSSGEISPVHFFGVYDGHGGSQVAKFCAERIHEVVAEEWERGAGGGDGWHRRWEAAFCSGFARADNEVIEEAIAPEIIGSTALVAAVSGCQIILSNCGDSRAVLYRGTQTIPLTVDHKPDREDELMRIERLGGRVINWNGARVYGVLAMSRAIGDRYLSPWIIPVPEVTFMTRSEEDECLILASDGLWDVLSNNEVGEVACHLLRRRQQSPTADETSPPLAQAIADHLTDLAYRKNSTDNISVIVVILKSKRKRRRRQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00946 471 SUPERFAMILY PP2C-like 168 462 IPR036457 -
Eupl10g00946 471 FunFam Protein phosphatase 2C 51 167 469 - -
Eupl10g00946 471 PANTHER PROTEIN PHOSPHATASE 141 459 IPR015655 GO:0004722|GO:0006470
Eupl10g00946 471 SMART PP2C_4 163 459 IPR001932 -
Eupl10g00946 471 CDD PP2Cc 176 461 IPR001932 -
Eupl10g00946 471 Gene3D - 161 471 IPR036457 -
Eupl10g00946 471 ProSiteProfiles PPM-type phosphatase domain profile. 174 461 IPR001932 -
Eupl10g00946 471 Pfam Protein phosphatase 2C 180 454 IPR001932 -
Eupl10g00946 471 ProSitePatterns PPM-type phosphatase domain signature. 224 232 IPR000222 GO:0043169
Eupl10g00946 471 SMART PP2C_SIG_2 203 461 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00946 Eupl-Chr10 29064191 29080764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00946 133 470 PP2C-type Phosphatase Gene Family AT1G17550 46.419 1.05e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00946 K14497 - nnu:104592057 563.533