Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00945 ATGACTCGGCGGTGCTCTCATTGCAGTAACGACGGGCACAACTCGCGAACGTGTCGGACGAGAGGAGGGGTGAGGCTTTTTGGTGTTCGACTCACCGATGGGCCTATGAAGAAGAGTGCGAGCATGGGGAATCTCTCCTCTGCTCATTACTACTACTCGTCGTCTGCTGCGGCCTCTCCAAACCCTAGTTCTCCTTCTTCTGATGCTCTTCGAGATCCAACGCCGGTCGCAGAAGGTTACGTTTCTGATGATCCTGCTCACACTTCTTGTTCTTCGAATTGCCGCGGCGATCGGAAAAAAGGCATCCCATGGACAGAGGAGGAGCATAGGCTGTTCCTAATGGGTCTCCAGAAGTTGGGGAAAGGGGACTGGCGTGGCATCGCACGTAATTTTGTTGTGTCAAGGACTCCTACCCAGGTAGCCAGCCATGCCCAGAAGTACTTCATCCGGCAGAGTAATGCAACCCGAAGAAAGAGACGGTCTAGCCTATTCGACATGGTCCCAGATATGTCCACCGATCCACCGCCAGTACCAGAGGAACCGTTCATGCTCCACTCTTCTCAGGCAGGTGAAACTGATAATGTGAACCCATTACCTCCTCTGCATCTCTCTCTCCACCGGGAATGTGAACCAATGGAAACCACTTCCGATGAAACCCATACAGAAGCAGGAGAAACTGTAACATGTAGCAATTTCGCACCAATCGCTCCTGCATTTTTCCCAGCCTATCCACCCCGAATCCCATTCTGGTCACCAGATATAGCCCCAACAGGAGAAGGGAAAGAAGGGGAAACTTCACATCATCAAGTCCTAAAGCCGACCCCAATCCTGTCCAAGGAGCCTGTCAATGTAGATGAACTTGTGGGCATGTCTAAGCTCACGTTAGGAACAGCTGTCGCTGGCCGTATAAATCCGTCACCACTCTCCATGAAACTTCTTGGAGCTCCTTCAAGACAGTCAGCATTTCAAGTGAACCAACCGGTTAATGGGTCAGGTTTGAACAAGAGTAACAGTAATGCAATCCATGCAGTTTGA 1035 0.5101 MTRRCSHCSNDGHNSRTCRTRGGVRLFGVRLTDGPMKKSASMGNLSSAHYYYSSSAAASPNPSSPSSDALRDPTPVAEGYVSDDPAHTSCSSNCRGDRKKGIPWTEEEHRLFLMGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMSTDPPPVPEEPFMLHSSQAGETDNVNPLPPLHLSLHRECEPMETTSDETHTEAGETVTCSNFAPIAPAFFPAYPPRIPFWSPDIAPTGEGKEGETSHHQVLKPTPILSKEPVNVDELVGMSKLTLGTAVAGRINPSPLSMKLLGAPSRQSAFQVNQPVNGSGLNKSNSNAIHAV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00945 344 Gene3D - 102 153 - -
Eupl10g00945 344 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Eupl10g00945 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Eupl10g00945 344 MobiDBLite consensus disorder prediction 54 70 - -
Eupl10g00945 344 MobiDBLite consensus disorder prediction 54 100 - -
Eupl10g00945 344 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Eupl10g00945 344 PANTHER TRANSCRIPTION FACTOR KUA1 3 275 - -
Eupl10g00945 344 CDD SANT 103 148 IPR001005 -
Eupl10g00945 344 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Eupl10g00945 344 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Eupl10g00945 344 FunFam transcription factor MYB1R1 102 153 - -
Eupl10g00945 344 MobiDBLite consensus disorder prediction 324 344 - -
Eupl10g00945 344 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Eupl10g00945 344 SMART sant 100 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00945 Eupl-Chr10 29051922 29056324 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl10g00945 Myb_DNA-binding 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00945 - - nnu:104592058 493.812