Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00933 ATGATGCCAGAGTTGCGTAGTGGAGTGCGCAGGGGTCGGGCAGCAGCGCAACAGCCAAATCAGATTGAAGGCGAAAAGGAGGTTCCGAGGACTCGACGGAGGCGAACAGCGAAGAACAAACAGCCGATCAATGAGAGTGATGTTTTCTTAAAGGTTTCTGTGCCGACTCCATCGTTGCAGGCTAAGGAGGAGGAGGACCGGAGGGGTTTGGAGAAAATCCGCGGAGGCGGTGGTGATATTGGTGGGTTGGTTGGGGCAGAGGAGGAGGTAGCAGAGAAGCAGATGGATGATAACGATAGTGGAGCGAGGAGCGCCGATAAAGCTCCTGCGGCCGAAGAAGAAGGAAGCACAGCGCCACTTCCTGAGAAGGTCCAGGTTGGTGGTTCGCCAGTGTACAGAATTGAAAGAAAGCTGGGCAAAGGAGGATTTGGACAAGTGTATGTTGGTCGTCGGATTTCAGGTGCAAGTGGGACCACTGGACCAGGGGCTATAGAGGTGGCCTTAAAATTTGAGCATAGAAGTAGTAAGGGCTGCAACTATGGACCCCCGTACGAGTGGCAAGTCTACAACACTCTTGGTGGCAGTCATGGTGTGCCACGAGTCCACTTCAAAGGACGGCAAGGGGACTATTACATCATGGTTATGGATATGTTGGGACCAAGTTTGTGGGATGTTTGGAATAACAATTCTCATACGATGTCCATTGAAATGGTTGCATGCATCGCGATCGAAGCAATCTCTATACTGGAGAAGATGCACTCTAGAGGGTATGTGCATGGGGATGTAAAGCCAGAGAATTTTTTGCTTGGTCCCCCTGGGACTCCTGAAGAGAAAAAACTGTTTCTAGTTGATCTTGGATTAGCGACTAGATGGCGGGATAGTTCAACTGGTCAGCATGTTGAGTATGACCAACGACCAGATGTTTTTAGGGGAACAGTGCGATACGCTAGTGTGCATGCTCACCTGGGAAGAACTGGAAGCAGGAGAGATGACTTAGAATCTCTAGCTTACACACTTGTTTTTCTTCTCCGTGGCCGTCTGCCTTGGCAAGGATACCAGGGAGAGAATAAGGGGTTCCTCGTCTGCAAGAAGAAGATGGCAACATCTCCGGAGACACTTTGTTGCTTTTGTCCACAGCCATTCAGACAGTTTGTTGAGTATGTGGTGAACTTGAAATTCGATGAGGAACCTAACTACGCAAAATATATATCCCTCTTTGATGGGATTATAGGTCCAAATCCAGATATCAGGCCAATTAACACAGATGGTGCACAGAAGCTTATATACCACATTGGCCATAAGAGAGGCCGGTTGACAATGGAAGAAGAGGATGATGAGCAACCAAAGAAGAAGGTCAGAATGGGGATGCCTGCAACACAATGGATTAGTGTTTACAATGCTCGACGACCTATGAAGCAAAGGTATCACTATAACGTGGCAGATGGGAGGCTTGCCCAGCACATTGAGAAGGGCAATGAAGATGGGCTATATATCAGCAGTGTGGCTTCTTGTACAAATCTATGGGCCCTGATTATGGATGCGGGCACTGGTTTTACTGATCAAGTTTATGAACTCTCACCGAGTTTTCTTCACAAAGAATGGATTATGGAGCAGTGGGAGAAGAATTATTATATTAGTGCGATAGCAGGGGCTAATAATGGGAGCTCTTTAGTAGTGATGTCTAAAGGTACACAGTATGCACAGCAGTCCTACAAGGTTAGCGATTCATTTCCGTTCAAGTGGATAAACAAGAAGTGGAGGGAGGGATTCTTCGTCACCTCCATGGCCACTGCTGGAAGCAGATGGGGAGTTGTTATGTCCCGAAGTGCAGGATTTTCAGACCAGGTTGTTGAACTTGATTTTTTATACCCCAGTGAAGGTATTCATCGGAGGTGGGATAGTGGTTATCGAATCACGGCAACTGCAGCAACTTGGGACCAGGCTGCTTTCGTTCTTAGTGTACCAAGAAGAAAGCCTGCAGATGAAACACAAGAAACTCTTCGGACATCGGCTTTTCCAAGTACACATGTCAAGGAGAAATGGGCTAAAAATCTTTATCTTGCATCTGTTTGCTATGGTCGAACAGTTTCATGA 2094 0.4737 MMPELRSGVRRGRAAAQQPNQIEGEKEVPRTRRRRTAKNKQPINESDVFLKVSVPTPSLQAKEEEDRRGLEKIRGGGGDIGGLVGAEEEVAEKQMDDNDSGARSADKAPAAEEEGSTAPLPEKVQVGGSPVYRIERKLGKGGFGQVYVGRRISGASGTTGPGAIEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPEEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIIGPNPDIRPINTDGAQKLIYHIGHKRGRLTMEEEDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADGRLAQHIEKGNEDGLYISSVASCTNLWALIMDAGTGFTDQVYELSPSFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYAQQSYKVSDSFPFKWINKKWREGFFVTSMATAGSRWGVVMSRSAGFSDQVVELDFLYPSEGIHRRWDSGYRITATAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYLASVCYGRTVS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00933 697 CDD STKc_CK1 132 406 - -
Eupl10g00933 697 MobiDBLite consensus disorder prediction 89 110 - -
Eupl10g00933 697 Pfam Protein kinase domain 132 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00933 697 PANTHER CASEIN KINASE-RELATED 132 663 - -
Eupl10g00933 697 ProSiteProfiles Protein kinase domain profile. 132 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00933 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Eupl10g00933 697 ProSitePatterns Protein kinases ATP-binding region signature. 138 169 IPR017441 GO:0005524
Eupl10g00933 697 FunFam casein kinase 1-like protein HD16 105 453 - -
Eupl10g00933 697 SUPERFAMILY Protein kinase-like (PK-like) 132 413 IPR011009 -
Eupl10g00933 697 Gene3D Transferase(Phosphotransferase) domain 1 93 454 - -
Eupl10g00933 697 MobiDBLite consensus disorder prediction 1 124 - -
Eupl10g00933 697 MobiDBLite consensus disorder prediction 60 74 - -
Eupl10g00933 697 SMART serkin_6 132 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00933 Eupl-Chr10 28911819 28920648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00933 249 406 MAP Kinase Kinase Kinase AT5G50180 26.250 1.94e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl10g00933 Pkinase 6.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00933 - - nnu:104592067 1304.27