Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00928 ATGATGGCTGTAACAACGTCCTGCAAGGAGACTAAAGTGGCATTGGACAACGGAAAATATGTGCGCTACACGCCTGAACAGGTGGAAGCGCTCGAAAGGCTCTATCATGACTGCCCAAAGCCCAGTTCCCTCCGACGACAACAGCTGATCAGAGAATGCCCAATTCTCTCCAACATTGAGCCCAAACAGATAAAAGTCTGGTTTCAAAACCGAAGATGCCGAGAGAAGCAGCGGAAAGAGGCGTCACGTCTCCAAGCTGTAAATCGGAAGCTAACGGCAATGAACAAGCTTTTAATGGAGGAGAACGACAGGTTGCAGAAGCAGGTGTCACAGCTGGTGTACGAGAATGGATACTTTCGACAACAGACTCAGAACACGACCCTTGCCACCACTGACACAAGTTGTGAGTCGGTGGTGACCAGCGGTCAACACCATTTGACGCCTCAGCATCCGCCAAGGGATGCTAGCCCTGCAGGACTTCTGTCCATTGCAGAGGAAACTTTAACAGAGTTTCTTTCGAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGAGTGGCAGCGCGAGCCTGTGGCCTGGTGGGTCTAGAACCTACAAGGGTCGCAGAAATCCTCAAAGATCGGCCTTCGTGGTTTCGTGATTGCCGAGCTGTGGATGTGCTAAACGCGCTGCCCACTGGAAATGGTGGAACCATTGAGCTGCTTTACATGCAGCTATATGCCCCAACAACATTGGCACCTGCTCGTGATTTCTGGTTGCTGCGCTACACTTCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCACTAAGCAGTACTCAGGGTGGTCCAAGCATGCCACAAGTGCAGCATTTTGTGAGAGCAGAAATGCTGCCAAGCGGGTACCTGATAAGGCCCTGTGAAGGGGGTGGGTCAATAATACACATCGTTGATCATATGGATTTGGAGCCATTGAGTGTGCCTGAAGTTTTGCGTCCGCTATATGAATCGTCAACAGTGCTTGCTCAAAAGACTACAATGCCGGCACTACGCCAGTTAAGGCAGATTGCTCAAGAGGTTTCTCAATCAACTGTCACCGGTTGGGGCAGACAACCTGCTGCTCTACGAGCACTTAGCCAGAGACTGAGCAGGGGTTTTAATGAAGCTCTGAATGGCTTTACTGATGAGGGGTGGTCCACAATGGGAAGTGATGGCATGGATGATGTTACAATCCTTGTGAATTCATCTCCTGGAAAAATAATGGGTGTAAATCTTGCCTTTGCTAATGGATTTCCAGCTGTGAGCAATGCCGTCCTGTGTGCCAAGGCGTCCATGCTTTTACAGAATGTGCCTCCAGCTGTACTTCTCAGATTCCTGCGAGAACACCGCTCGGAATGGTCGGACAGTAACATTGATGCCTACTCAGCTGCAGCTGTCAAAGTTGGTCCCTGTAGCTTACCTGGGTCATGGGTTGGAGGTTTTGGGGGTCAGGTTATCCTTCCACTAGCTCACACAATTGAGCATGAAGAGTTCTTGGAGGTCATTAAGTTGGAAAGTGGCCAGTGTCAGGAGGACACGGTTATGTCTAGAGACATGTTTCTCTTGCAACTCTGTAGTGGGGTGGATGAGAATGCTGTTGGAACCTGTGCTGAACTTATCTTTGCCCCCATTGATGCATCTTTTGCTGATGATGCACCTCTCTTACCTTCTGGTTTCCGCATTATTCCTCTCGACTCTAGGGTGGATGCCTCCAGTCCAAATCGCACGTTAGACCTTGCTTCTGCTCTCGAGGTTGGGCCAGCTGGAAATAGAACGTCTGGTGATTATTCTGGGAATTCTGGCAGCATGAGGTCTGTGATGACAATAGCATTTCAGTTTGCATTTGAGAGCCATCTCCAAGACAATGTAGCATCCATGGCTCGGCAATACGTTCGCAGCATTATATCATCAGTACAGAGGGTAGCGCTGGCCCTTTCCCCTTCTCGTCTCAGTTCTCACCCTGGTCTCCGTCCACCACCTGGCAGTCCTGAAGCACACACACTTGCTCGTTGGATCTGTCACAGCTATAGGTGCTATTTGGGTGTGGAGCTACTCAAACCCAGCAGTGAAGGAAATGAATCCATTCTTAAAACGCTTTGGCATCACTCTGATGCTATCATGTGCTGCTCTGTGAAGGCATTGCCAGTTTTCACGTTTGCAAATCAGGCAGGTCTTGACATGCTTGAGACAACCTTGGTTGCCTTGCAAGACATAACTCTGGAAAAGATATTTGATGATCATGGGCGGAAGACTCTTTGCACAGAGTTCCCACAGATAATGCAACAGGGTTTCACATGTCTTCAAGGCGGTATCTGTCTGTCGAGCATGGGCAGGCCGGTCTCCTATGAGAGAGCAGTGGCTTGGAAGGTGTTGGACGAGGAAGATAATGCCCACTGCATTTGCTTTGTGTTCATCAACTGGTCTTTTGTCTGA 2520 0.4952 MMAVTTSCKETKVALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNTTLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNALPTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLSSTQGGPSMPQVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPLSVPEVLRPLYESSTVLAQKTTMPALRQLRQIAQEVSQSTVTGWGRQPAALRALSQRLSRGFNEALNGFTDEGWSTMGSDGMDDVTILVNSSPGKIMGVNLAFANGFPAVSNAVLCAKASMLLQNVPPAVLLRFLREHRSEWSDSNIDAYSAAAVKVGPCSLPGSWVGGFGGQVILPLAHTIEHEEFLEVIKLESGQCQEDTVMSRDMFLLQLCSGVDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSRVDASSPNRTLDLASALEVGPAGNRTSGDYSGNSGSMRSVMTIAFQFAFESHLQDNVASMARQYVRSIISSVQRVALALSPSRLSSHPGLRPPPGSPEAHTLARWICHSYRCYLGVELLKPSSEGNESILKTLWHHSDAIMCCSVKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTLCTEFPQIMQQGFTCLQGGICLSSMGRPVSYERAVAWKVLDEEDNAHCICFVFINWSFV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00928 839 FunFam Homeobox-leucine zipper protein REVOLUTA 19 74 - -
Eupl10g00928 839 CDD homeodomain 19 79 IPR001356 GO:0003677
Eupl10g00928 839 SMART START_1 162 372 IPR002913 GO:0008289
Eupl10g00928 839 CDD bZIP 71 110 - -
Eupl10g00928 839 Gene3D - 13 85 - -
Eupl10g00928 839 FunFam homeobox-leucine zipper protein ATHB-15 198 379 - -
Eupl10g00928 839 Gene3D - 197 380 IPR023393 -
Eupl10g00928 839 Coils Coil 74 115 - -
Eupl10g00928 839 SMART HOX_1 16 82 IPR001356 GO:0003677
Eupl10g00928 839 Pfam START domain 163 371 IPR002913 GO:0008289
Eupl10g00928 839 ProSiteProfiles START domain profile. 153 368 IPR002913 GO:0008289
Eupl10g00928 839 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Eupl10g00928 839 SUPERFAMILY Homeodomain-like 18 82 IPR009057 -
Eupl10g00928 839 SUPERFAMILY Bet v1-like 162 374 - -
Eupl10g00928 839 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Eupl10g00928 839 CDD START_ArGLABRA2_like 157 373 - -
Eupl10g00928 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 15 839 IPR044830 GO:0003700
Eupl10g00928 839 Pfam MEKHLA domain 696 838 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00928 Eupl-Chr10 28843136 28852975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00928 15 839 Homeobox Transcription Factor Family AT4G32880 79.567 0.0 1377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl10g00928 START 4.4e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00928 K09338 - nnu:104604509 1567.36