Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00908 ATGGCGGAACAGCAGAATTCAGAGGCAGAGAGCAGTAGCAACTCGGTCTCATCTTCTCCATCATCTCCATCTTCATCTGGGTTATCTCAATCTCTTCAGAACTCGGTTTCAGACCCATCAAAAAAACAGCCAAAATCACAAGACGCAGAAGGGAAAAGAAGCAAGAGGATGAGAGATTGCAGCAAACACCCAGCTTACAGAGGTGTACGAATGCGCAACTGGGGTAAATGGGTGTCTGAAATTCGCGAGCCTCGCAAGAAATCGAGAATCTGGCTCGGTACATTCCCAACTCCTGAAATGGCAGCAAGAGCTCACGACGTCGCCGCGTTAAGCATAAAGGGTAACGCAGCGATTCTTAATTTCCCTGAACTCGCCGGGTCTCTTCCTCGTCCAGCCACGCTTTCTCCACGAGACATCCAAGCAGCAGCAGCAAAAGCAGCTACCATGGAAAAATTCAATTCACTCTCTTCATCTTCAACGTCATTGTCATCGTTAGGGTCGACGTCGGATGTTGAACTAGGCGAGATCGTGGAGTTACCGAGTCTAGGGACAAGTTTTGACTCATCCGAGTCACAGAACGATTTCATTTATATTGACTCGGTTGATGGGTGGCTTTATCCTCCGCCATGGTTGCCGGGTGCTGACGATTGTGGGTATTTTTCCGATCAGATATCGATGCAGGAGAGTCAAATTCCGAGCAGCTTTGAAGCTTTTTTGTGGGATTATTAG 729 0.4801 MAEQQNSEAESSSNSVSSSPSSPSSSGLSQSLQNSVSDPSKKQPKSQDAEGKRSKRMRDCSKHPAYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNAAILNFPELAGSLPRPATLSPRDIQAAAAKAATMEKFNSLSSSSTSLSSLGSTSDVELGEIVELPSLGTSFDSSESQNDFIYIDSVDGWLYPPPWLPGADDCGYFSDQISMQESQIPSSFEAFLWDY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00908 242 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Eupl10g00908 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 25 186 - -
Eupl10g00908 242 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Eupl10g00908 242 MobiDBLite consensus disorder prediction 1 42 - -
Eupl10g00908 242 MobiDBLite consensus disorder prediction 43 64 - -
Eupl10g00908 242 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Eupl10g00908 242 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Eupl10g00908 242 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Eupl10g00908 242 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Eupl10g00908 242 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Eupl10g00908 242 CDD AP2 66 124 IPR001471 GO:0003700|GO:0006355
Eupl10g00908 242 MobiDBLite consensus disorder prediction 1 64 - -
Eupl10g00908 242 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00908 Eupl-Chr10 28632093 28633467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00908 34 216 AP2-EREBP Transcription Factor Family AT5G11590 61.500 1.14e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl10g00908 AP2 6.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00908 K09286 - nnu:104592095 329.331