Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00882 ATGGTTCCCCGTGAGATCCGCAGTTCTTCAGATGAAGAGGGAGAGGATGACAGTGGCATCACTCAACAATTGCAAACACTACGACCTCTGATTCCAAATATCACAAAGACGGATGCGAGATCGATCCTTGAAGAGACCCACGATTATTTGCAAAGAATTCATGAAGAAACAGAGAAAGTTGAGAAGGAATTGTCGCTGGGATCAGACAATCCAAGCTCATCGGGACGCCAAGGTCTCCAGATACTGAGGGTGGAGACAGAGAAGCTTATGGAGGGAAGGTTTGTGGTGAAGATAAGTTGGAAGAGAGGGTCGGGTGTAGCAGGTAACGTGCAGCGCGTGATTGAGTGTTTGGATGTGAAGATGACTTCGATCGTGCTCAACGAGAGAAATCCGGATGAGATGTTAACCACTGCTTTTGTCAAAGTGAAGAAAGAGAAGAAAATGACAGAAGAGGAGCTCCATGATCTTATAATGAATGCAGCAGCAAGGTTTGGGTTGCAAACCTAA 507 0.4596 MVPREIRSSSDEEGEDDSGITQQLQTLRPLIPNITKTDARSILEETHDYLQRIHEETEKVEKELSLGSDNPSSSGRQGLQILRVETEKLMEGRFVVKISWKRGSGVAGNVQRVIECLDVKMTSIVLNERNPDEMLTTAFVKVKKEKKMTEEELHDLIMNAAARFGLQT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00882 168 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 64 IPR036638 GO:0046983
Eupl10g00882 168 MobiDBLite consensus disorder prediction 1 28 - -
Eupl10g00882 168 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 21 159 - -
Eupl10g00882 168 CDD bHLH_AtbHLH_like 20 61 IPR045239 -
Eupl10g00882 168 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 4 53 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00882 Eupl-Chr10 28361222 28363576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00882 23 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 25.714 6.90e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00882 K26214 - msin:131223019 178.333